args passed: 'E:\foldit_64\Foldit\Foldit.exe' args used: 'E:\foldit_64\Foldit\Foldit.exe' '-resources' 'cmp-resources-c4a859bba7d394f52227935b7fb922e9/resources' '-database' 'cmp-database-9cc626267aa5f6df9bcb5f94584712fd/database' '-interactive_game' 'novice' '-interactive:interactive_residue_types' '-ignore_unrecognized_res' '-ignore_zero_occupancy' 'false' '-in::use_truncated_termini' '-out:levels' 'all:warning' 'interactive:info' 'standalone:info' 'game:info' '-out:no_color' '-load_PDB_components' 'false' interactive.util.options_dict: {0} Loading options file standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files game.application.GameApplication: {0} Initializing game.application.server.CurlFetcher: {0} https://fold.it/api/post_crash_report interactive.sound/SoundTheme: {0} SoundTheme::load: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01 interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_00.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_01.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_02.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_03.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_04.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\sounds/organic_01/rotamer_land_05.ogg standalone.application.StandaloneApplication: {0} (@init_machine_log)intro_level_version_ is 0 interactive.util.options_dict: {0} We're loading in the hotkeys interactive.util.options_dict: {0} We loaded in the hotkeys interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} SVM classifier successfully loaded interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Feature list successfully loaded interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Valid classifier feature list interactive.remote.RemoteThread: {0} REMOTE Local Address: 192.168.178.104 interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_UNDO_ALT to hotkey [Ctrl+Z] - hotkey is already bound to UNDO_UNDO interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_REDO_ALT to hotkey [Ctrl+Y] - hotkey is already bound to UNDO_REDO standalone.application.StandaloneApplication: {0} about to create view_options_button_ interactive.application.shared.HotkeyTable: {0} Could not bind ACTION_INSERT_RESIDUE to hotkey [I] - hotkey is already bound to UNDO_RESTORE_BEST_CREDIT interactive.application.shared.ToolApplication: {0} setting side chain mode to: 0 Don't Show (Fast) interactive.remote.RemoteDialog: {0} Found remote enable option: 0 game.application.AlphaFoldDialog: {0} POS UDim< rel:0 abs:345 self:0 >:UDim< rel:0 abs:-56 self:0 > game.application.server.Updater: {0} checking updates... game.application.server.CurlFetcher: {0} https://fold.it/api/get_update_components game.application.server.Updater: {0} binary game.application.server.Updater: {0} local: '901b8cbbc1000596a44938ac3a59f081' game.application.server.Updater: {0} remote: '901b8cbbc1000596a44938ac3a59f081' game.application.server.Updater: {0} database game.application.server.Updater: {0} local: '9cc626267aa5f6df9bcb5f94584712fd' game.application.server.Updater: {0} remote: '9cc626267aa5f6df9bcb5f94584712fd' game.application.server.Updater: {0} resources game.application.server.Updater: {0} local: 'c4a859bba7d394f52227935b7fb922e9' game.application.server.Updater: {0} remote: 'c4a859bba7d394f52227935b7fb922e9' game.application.server.Updater: {0} cleaning up old components: game.application.server.Updater: {0} binary 901b8cbbc1000596a44938ac3a59f081 game.application.server.Updater: {0} database 9cc626267aa5f6df9bcb5f94584712fd game.application.server.Updater: {0} resources c4a859bba7d394f52227935b7fb922e9 game.application.server.CurlFetcher: {0} https://fold.it/api/get_news standalone.application.StandaloneApplication: {0} Show splash! standalone.application.StandaloneApplication: {0} Playing: sounds/organic_01/splashscreen.ogg standalone.application.StandaloneApplication: {0} Converting any old-style quicksaves and autosaves... standalone.application.GeneralOptionsPanel: {0} buildid: V35-20240517-3a0ae6a15b-win_x64-devprev game.application.GameApplication: {0} Ended pre-login init game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info game.application.GameApplication: {0} Logged in with player ID: 108474 game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event BoincObject Error reading "0002013467.ir_puzzle". Unknown enum value for shared::StandaloneSessionConfig::Phase: AllHands. (C:\Users\jflat06\foldit\develop\source\src\interactive\util\EnumMapping.hh:63) game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 standalone.application.intro.level_util: {0} JM level version = 0 standalone.application.intro.level_util: {0} Using file: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\levels/campaign_2020.intros standalone.application.intro.level_util: {0} Using file: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\levels/educational_puzzles.intros standalone.application.intro.level_util: {0} Using file: cmp-resources-c4a859bba7d394f52227935b7fb922e9\resources\levels/endless_puzzles.intros game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_completions standalone.application.boinc.Puzzle: {0} has key .odensity standalone.application.boinc.Puzzle: {0} has key .owts standalone.application.boinc.Puzzle: {0} has key .opdb core.io.pose_from_sfr.PoseFromSFRBuilder: {0} [ WARNING ] skipping pdb residue b/c it's missing too many mainchain atoms: 1248 C ARG ARG:CtermTruncation core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CG on residue MET:NtermTruncation 111 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: SD on residue MET:NtermTruncation 111 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CE on residue MET:NtermTruncation 111 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CB on residue LYS 196 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CG on residue LYS 196 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CD on residue LYS 196 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CE on residue LYS 196 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: NZ on residue LYS 196 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CB on residue SER 197 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: OG on residue SER 197 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CB on residue LYS 199 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CG on residue LYS 199 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CD on residue LYS 199 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CE on residue LYS 199 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: NZ on residue LYS 199 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CB on residue ALA 200 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: OXT on residue PRO:CtermProteinFull 201 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CB on residue PRO:CtermProteinFull 201 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CG on residue PRO:CtermProteinFull 201 core.conformation.Conformation: {0} [ WARNING ] missing heavyatom: CD on residue PRO:CtermProteinFull 201 interactive.rosetta_util.rosetta_game_pose: {0} Autogenerating secondary structure information for input structure. interactive.rosetta_util.rosetta_game_pose: {0} Adding secstruct through DSSP interactive.rosetta_util.rosetta_game_pose: {0} Finished adding secstruct through DSSP standalone.application.boinc.Puzzle: {0} has key .opuzzle_setup standalone.application.boinc.Puzzle: {0} starting score : 849.446 standalone.application.boinc.Puzzle: {0} puzzle loaded standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave.ir_solution loaded. game.application.GameApplication: {0} Loading puzzle 2013859 game.application.server.CurlFetcher: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} https://fold.it/api/post_gameplay_event standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-best.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-recentbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-creditbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Quicksave puzzles/0002013859/0000108474/default/quicksave.ir_solution loaded. standalone.application.StandaloneApplication: {0} Quicksave puzzles/0002013859/0000108474/default/quicksave3.ir_solution loaded. standalone.application.StandaloneApplication: {0} Quicksave puzzles/0002013859/0000108474/default/quicksave8.ir_solution loaded. standalone.application.StandaloneApplication: {0} Quicksave puzzles/0002013859/0000108474/default/quicksave50.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-best.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-recentbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-creditbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-best.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-recentbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013859/0000108474/default/autosave-creditbest.ir_solution loaded. interactive.application.actions.loop_hash_utils: {0} building library...interactive.application.actions.loop_hash_utils: {0} done. standalone.application.TitlePanel: {0} TitlePanel new session standalone.application.ScorePanel: {0} ScorePanel new session standalone.application.ViewOptionsPanelButton: {0} ViewOptionsPanelButton new session standalone.application.HelpPanelButton: {0} HelpPanelButton new session standalone.application.ActionOptionsPanelButton: {0} ActionOptionsPanelButton new session standalone.application.UndoPanelButton: {0} UndoPanelButton new session standalone.application.CookbookPanelButton: {0} CookbookPanelButton new session standalone.application.HamburgerPanelButton: {0} HamburgerPanelButton new session interactive.application.appposeview.ElectronDensityGeom: {0} set up new density... interactive.application.appposeview.ElectronDensityGeom: {0} updating surface... game.application.server.PrereleaseDialog: {0} PHASE PRE? : 0 game.application.server.PrereleaseDialog: {0} Normal game.application.server.PrereleaseDialog: {0} PreRelease game.application.server.CurlFetcher: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} https://fold.it/api/get_solutions game.application.server.CurlFetcher: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} https://fold.it/api/get_recipes game.application.GameApplication: {0} GROUP CHAT CHANNEL: Contenders game.application.server.CurlFetcher: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} https://fold.it/api/get_irc_server interactive.application.appposeview.ElectronDensityGeom: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} updating surface... game.application.GameApplication: {0} BOINC says connect to: irc.fold.it:6667 game.application.GameApplication: {0} Using nick: Bletchley_Park game.util.IRC: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. {0} IRC::disconnect game.util.IRC: Rosetta thread index was requested, but this is neither a thread that Rosetta launched, nor the thread from which Rosetta launched threads! This can happen if external code (e.g. PyRosetta) has already launched threads. Silencing further instances of this warning. {0} IRC::connect game.application.GameApplication: {0} Ended Initialization of GameApplication game.util.IRC: {0} IRC::connect connecting game.util.IRC: {0} Entering IRC::run game.util.IRC: {0} IRC::run connected game.application.IRCThread: {0} Notice : This nickname is registered and protected. If it is your game.application.IRCThread: {0} Notice : nick, type /msg NickServ IDENTIFY password. Otherwise, game.application.IRCThread: {0} Notice : please choose a different nick. game.application.IRCThread: {0} Notice : Password accepted - you are now recognized. game.application.IRCThread: {0} IDENTIFIED game.util.IRC: {0} Joined IRC channel #global game.util.IRC: {0} Joined IRC channel #veteran game.util.IRC: {0} Joined IRC channel #contenders standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} Packer cancelled interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111100000000001111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.recipe.RecipeLibraryView: {0} RUNNING: 102513 standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.recipe.RecipeLibraryView: {0} RUNNING: 102513 standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.StandaloneApplication: {0} Marking recipe 102513 as done. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild 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***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize 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THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10001111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 6 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 7 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize standalone.application.StandaloneApplication: {0} Marking recipe 0 as done. standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} Packer cancelled interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111110000000011111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} Packer cancelled interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.recipe.RecipeLibraryView: {0} RUNNING: 102513 standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11001111111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_score game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011111 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{0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000011111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11000000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts 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.owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD 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WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 13 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD 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WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000011111 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD 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interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD 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{0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110001111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD 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THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 13 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 13 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 12 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 13 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 13 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110001111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize standalone.application.StandaloneApplication: {0} Marking recipe 102513 as done. standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose 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game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} Packer cancelled interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.recipe.RecipeLibraryView: {0} RUNNING: 102513 standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11110000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11110000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11110000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11110000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11110000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD 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.osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000001111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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{0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: 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.ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb 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***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD 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for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack 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ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} 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{0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild 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11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 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***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} 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f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this 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core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} 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ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize 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THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 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***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack 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RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} 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Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD 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Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} 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STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 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***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: 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.opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: 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.opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10011111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains 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11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111001111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 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interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110000011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10000000111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 1 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11011111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10011111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 10111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111101111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack 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interactive.application.shared.tool_util: {0} RT: 11111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} 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.opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11110111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 10000000111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111111011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 11111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 9 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 10 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 11100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 11111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize standalone.application.StandaloneApplication: {0} Marking recipe 102513 as done. standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionUntrimPose interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 game.application.server.CurlFetcher: {0} https://fold.it/api/post_score game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution interactive.application.actions.cart.PoseLoopThreadActionCart: {0} Packer cancelled interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_score game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionTrimPose game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .ofilters ff9601d2e742b33414f769eee8e85380 standalone.application.boinc.Puzzle: {0} .opdb b63c366e386b6210bad9b70a1620f768 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.boinc.Puzzle: {0} .odensity 95acfdaaaf2bc81efe147eafba1bb7f8 standalone.application.boinc.Puzzle: {0} .opdb a732b3acf3ce85cde2f1e62a71d876dc standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ocnstr 0cd310cbde9aa013735e4a82b49454cb standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 3ab0f12cadf46ae1e22b3732cb9c4328 standalone.application.boinc.Puzzle: {0} .opuzzle_setup ab52820fdc1df5fc0ba357c02ec7f20f standalone.application.boinc.Puzzle: {0} .osmiles_queue a0c7d2a84fa84433ebe8ddee15701f6e standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params f1c85b0f444ffa331a094e9ebb11ea34 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores standalone.application.recipe.RecipeLibraryView: {0} RUNNING: 102513 standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: RecipeRunnerAction interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1101111111111111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000001111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111111111110111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111101111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111100000000011111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111100011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1100111111111111111 core.chemical.AtomICoor: {0} [ WARNING ] IcoorAtomID::atom_id(): Cannot get atom_id for POLYMER_LOWER of residue PRO:protein_cutpoint_upper 4. Returning BOGUS ID instead. core.conformation.Residue: {0} [ WARNING ] missing an atom: 4 OVU1 that depends on a nonexistent polymer connection! core.conformation.Residue: {0} [ WARNING ] --> generating it using idealized coordinates. interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000000111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1110111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000000111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111111111110011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 2 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 17 BB 3 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111110111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111100000000111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1111111111111100011 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 18 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1111100011100000011 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1000111111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000000111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRebuild interactive.application.shared.tool_util: {0} RT: 1001111111111111111 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 core.kinematics.AtomTree: {0} [ WARNING ] DOF for this torsion angle could not be found in AtomTree. core.conformation.Conformation: {0} [ WARNING ] Unable to set torsion angle in atom_tree: TorsionID 2 BB 1 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRebuild interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimizeSidechains interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimizeSidechains interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000000111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLocalMinimize interactive.application.shared.tool_util: {0} RT: 1000000111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLocalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionRepack interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionRepack interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionGlobalMinimize interactive.application.shared.tool_util: {0} RT: 1111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionGlobalMinimize game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event game.application.server.CurlFetcher: {0} https://fold.it/api/post_solution standalone.application.StandaloneApplication: {0} Marking recipe 102513 as done. game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles game.application.server.Server: {0} Error in server thread: Server reponse 504 (C:\Users\jflat06\foldit\develop\source\src\game\application\server\Server.cc:1286) game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles game.application.server.Server: {0} Error in server thread: Server reponse 502 (C:\Users\jflat06\foldit\develop\source\src\game\application\server\Server.cc:1286) interactive.util.options_dict: {0} Saving options file game.util.IRC: {0} IRC::disconnect game.util.IRC: {0} IRC::run recv error game.util.IRC: {0} Exiting IRC::run game.util.IRC: {0} quit successfully standalone.application.StandaloneApplication: {0} saving... interactive.util.options_dict: {0} Saving options file standalone.application.StandaloneApplication: {0} done. game.application.server.CurlFetcher: {0} https://fold.it/api/post_gameplay_event UNHANDLED EXCEPTION ****** Encountered Crash at Unknown File:0 Unknown Exception 1: RaiseException +61 bytes (no line) 2: __ExceptionPtrRethrow +350 bytes (no line) 3: std::rethrow_exception +14 bytes (no line) 4: std::_Rethrow_future_exception +30 bytes (no line) 5: std::_Task_async_state::_Get_value +318 bytes (no line) 6: std::future::get +69 bytes (no line) 7: game::application::GameApplication::log_play_event_if_needed +173 bytes (no line) 8: standalone::application::MoveCountTracker::log_move_counts +576 bytes (no line) 9: standalone::application::StandaloneApplication::handle_exit +346 bytes (no line) 10: game::application::GameApplication::handle_exit +62 bytes (no line) 11: ??$?RVStandaloneApplication@application@standalone@@$$VP8012@EAAXXZ$0A@@?$checked_fxn_wrapper@P8StandaloneApplication@application@standalone@@EAAXXZ@detail@util@interactive@@QEAAXV?$access_ptr@VStandaloneApplication@application@standalone@@@23@@Z +334 bytes (no line) 12: boost::detail::function::void_function_obj_invoker0,boost::_bi::list1 > > >,void>::invoke +66 bytes (no line) 13: interactive::gui::hide_dialog_and_call_callback +247 bytes (no line) 14: boost::_bi::list2 >,boost::_bi::value > >::operator(),boost::function)>,boost::_bi::list0> +252 bytes (no line) 15: boost::detail::function::void_function_obj_invoker0,boost::function)>,boost::_bi::list2 >,boost::_bi::value > > >,void>::invoke +34 bytes (no line) 16: interactive::gui::Button::on_mouse_up +114 bytes (no line) 17: interactive::gui::TopLevel::on_mouse_up +179 bytes (no line) 18: interactive::guiwrapper::GUIWrapper::generic_mouse_button_func +519 bytes (no line) 19: interactive::util::detail::checked_fxn_wrapper::operator() +371 bytes (no line) 20: boost::detail::function::void_function_obj_invoker0,boost::_bi::list5 >,boost::_bi::value,boost::_bi::value,boost::_bi::value,boost::_bi::value > >,void>::invoke +92 bytes (no line) 21: interactive::guiwrapper::GUIWrapper::enqueue_event +82 bytes (no line) 22: interactive::guiwrapper::win32::Win32Wrapper::win_mouse_button_func +470 bytes (no line) 23: interactive::guiwrapper::win32::Win32Wrapper::WndProc +1618 bytes (no line) 24: TranslateMessageEx +669 bytes (no line) 25: CallWindowProcW +156 bytes (no line) 26: CallWindowProcW +24 bytes (no line) 27: glDebugEntry +62238 bytes (no line) 28: TranslateMessageEx +669 bytes (no line) 29: TranslateMessage +482 bytes (no line) 30: interactive::guiwrapper::win32::Win32Wrapper::start +328 bytes (no line) 31: interactive::application::interactive_main +3254 bytes (no line) 32: game::application::game_main +2218 bytes (no line) 33: no symbol (no line) 34: no symbol (no line) 35: no symbol (no line) 36: BaseThreadInitThunk +13 bytes (no line) 37: RtlUserThreadStart +33 bytes (no line) 1: RaiseException +61 bytes (no line) 2: __ExceptionPtrRethrow +350 bytes (no line) 3: std::rethrow_exception +14 bytes (no line) 4: std::_Rethrow_future_exception +30 bytes (no line) 5: std::_Task_async_state::_Get_value +318 bytes (no line) 6: std::future::get +69 bytes (no line) 7: game::application::GameApplication::log_play_event_if_needed +173 bytes (no line) 8: standalone::application::MoveCountTracker::log_move_counts +576 bytes (no line) 9: standalone::application::StandaloneApplication::handle_exit +346 bytes (no line) 10: game::application::GameApplication::handle_exit +62 bytes (no line) 11: ??$?RVStandaloneApplication@application@standalone@@$$VP8012@EAAXXZ$0A@@?$checked_fxn_wrapper@P8StandaloneApplication@application@standalone@@EAAXXZ@detail@util@interactive@@QEAAXV?$access_ptr@VStandaloneApplication@application@standalone@@@23@@Z +334 bytes (no line) 12: boost::detail::function::void_function_obj_invoker0,boost::_bi::list1 > > >,void>::invoke +66 bytes (no line) 13: interactive::gui::hide_dialog_and_call_callback +247 bytes (no line) 14: boost::_bi::list2 >,boost::_bi::value > >::operator(),boost::function)>,boost::_bi::list0> +252 bytes (no line) 15: boost::detail::function::void_function_obj_invoker0,boost::function)>,boost::_bi::list2 >,boost::_bi::value > > >,void>::invoke +34 bytes (no line) 16: interactive::gui::Button::on_mouse_up +114 bytes (no line) 17: interactive::gui::TopLevel::on_mouse_up +179 bytes (no line) 18: interactive::guiwrapper::GUIWrapper::generic_mouse_button_func +519 bytes (no line) 19: interactive::util::detail::checked_fxn_wrapper::operator() +371 bytes (no line) 20: boost::detail::function::void_function_obj_invoker0,boost::_bi::list5 >,boost::_bi::value,boost::_bi::value,boost::_bi::value,boost::_bi::value > >,void>::invoke +92 bytes (no line) 21: interactive::guiwrapper::GUIWrapper::enqueue_event +82 bytes (no line) 22: interactive::guiwrapper::win32::Win32Wrapper::win_mouse_button_func +470 bytes (no line) 23: interactive::guiwrapper::win32::Win32Wrapper::WndProc +1618 bytes (no line) 24: TranslateMessageEx +669 bytes (no line) 25: CallWindowProcW +156 bytes (no line) 26: CallWindowProcW +24 bytes (no line) 27: glDebugEntry +62238 bytes (no line) 28: TranslateMessageEx +669 bytes (no line) 29: TranslateMessage +482 bytes (no line) 30: interactive::guiwrapper::win32::Win32Wrapper::start +328 bytes (no line) 31: interactive::application::interactive_main +3254 bytes (no line) 32: game::application::game_main +2218 bytes (no line) 33: no symbol (no line) 34: no symbol (no line) 35: no symbol (no line) 36: BaseThreadInitThunk +13 bytes (no line) 37: RtlUserThreadStart +33 bytes (no line)