args passed: 'C:\Foldit64\Fold7\Foldit.exe' args used: 'C:\Foldit64\Fold7\Foldit.exe' '-resources' 'cmp-resources-2eef38e6ee152935304bce03020ae9d9/resources' '-database' 'cmp-database-9cc626267aa5f6df9bcb5f94584712fd/database' '-interactive_game' 'novice' '-interactive:interactive_residue_types' '-ignore_unrecognized_res' '-ignore_zero_occupancy' 'false' '-in::use_truncated_termini' '-out:levels' 'all:warning' 'interactive:info' 'standalone:info' 'game:info' '-out:no_color' '-load_PDB_components' 'false' interactive.util.options_dict: {0} Loading options file standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files game.application.GameApplication: {0} Initializing game.application.server.CurlFetcher: {0} https://fold.it/api/post_crash_report interactive.sound/SoundTheme: {0} SoundTheme::load: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01 interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_00.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_01.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_02.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_03.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_04.ogg interactive.sound/SoundTheme: {0} loading: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\sounds/organic_01/rotamer_land_05.ogg standalone.application.StandaloneApplication: {0} (@init_machine_log)intro_level_version_ is 0 interactive.util.options_dict: {0} We're loading in the hotkeys interactive.util.options_dict: {0} We loaded in the hotkeys interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} SVM classifier successfully loaded interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Feature list successfully loaded interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Valid classifier feature list interactive.remote.RemoteThread: {0} REMOTE Local Address: 192.168.1.131 standalone.application.StandaloneApplication: {0} about to create view_options_button_ interactive.application.shared.ToolApplication: {0} setting side chain mode to: 2 Show All (Slow) interactive.remote.RemoteDialog: {0} Found remote enable option: 0 game.application.AlphaFoldDialog: {0} POS UDim< rel:0 abs:345 self:0 >:UDim< rel:0 abs:-6 self:0 > game.application.server.Updater: {0} checking updates... game.application.server.CurlFetcher: {0} https://fold.it/api/get_update_components game.application.server.Updater: {0} binary game.application.server.Updater: {0} local: '9f680abd0575afd06cc2094bb71bc050' game.application.server.Updater: {0} remote: '9f680abd0575afd06cc2094bb71bc050' game.application.server.Updater: {0} database game.application.server.Updater: {0} local: '9cc626267aa5f6df9bcb5f94584712fd' game.application.server.Updater: {0} remote: '9cc626267aa5f6df9bcb5f94584712fd' game.application.server.Updater: {0} resources game.application.server.Updater: {0} local: '2eef38e6ee152935304bce03020ae9d9' game.application.server.Updater: {0} remote: '2eef38e6ee152935304bce03020ae9d9' game.application.server.Updater: {0} cleaning up old components: game.application.server.Updater: {0} binary 9f680abd0575afd06cc2094bb71bc050 game.application.server.Updater: {0} database 9cc626267aa5f6df9bcb5f94584712fd game.application.server.Updater: {0} resources 2eef38e6ee152935304bce03020ae9d9 game.application.server.CurlFetcher: {0} https://fold.it/api/get_news standalone.application.StandaloneApplication: {0} Show splash! standalone.application.StandaloneApplication: {0} Playing: sounds/organic_01/splashscreen.ogg standalone.application.StandaloneApplication: {0} Converting any old-style quicksaves and autosaves... standalone.application.GeneralOptionsPanel: {0} buildid: V25-20230512-8ec99fe478-win_x64 game.application.GameApplication: {0} Ended pre-login init game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info game.application.GameApplication: {0} Logged in with player ID: 476462 game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27 standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 5c1466758b5afcebde9357f02a2277a2 standalone.application.boinc.Puzzle: {0} .opuzzle_setup b01cebc591e0b44ec7ded089c6c2ffd5 standalone.application.boinc.Puzzle: {0} .osmiles_queue 205dece35101dd46cfa91ef8fd5197f0 standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params 84bf224d12c208e9c004d0ae09e5893d standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .odensity 2623d2e59a1a54916b9ecf64c933086a standalone.application.boinc.Puzzle: {0} .opdb ff85367da1b664a03b7882e858e56358 standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ofilters a819701faeed43e052abdec7b8ba39f7 standalone.application.boinc.Puzzle: {0} .opdb e25df9b2269de127b198e042ae459f3e standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665 standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84 standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb cd7ce34bddf6ff589dd3c2980eb4dbc3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 43150cd6f2eb45e569efa1bfe4d34f75 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .sf db3e57ac6e1baf75c3e9488e44dc0c27 standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 5c1466758b5afcebde9357f02a2277a2 standalone.application.boinc.Puzzle: {0} .opuzzle_setup b01cebc591e0b44ec7ded089c6c2ffd5 standalone.application.boinc.Puzzle: {0} .osmiles_queue 205dece35101dd46cfa91ef8fd5197f0 standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params 84bf224d12c208e9c004d0ae09e5893d standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633 standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4 standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 55ebdc3066184544e214ab59b3e564d6 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55 standalone.application.boinc.Puzzle: {0} .ocmdline 9213d67f559515a2b1c07bd45bdb7cf9 standalone.application.boinc.Puzzle: {0} .ocnstr adee7993ef58481848b77be273ca0301 standalone.application.boinc.Puzzle: {0} .ofilters 7ac1df082f19ea354c52ff327c3f8072 standalone.application.boinc.Puzzle: {0} .opdb 16436660143808fe77ad2b2d3c6db17b standalone.application.boinc.Puzzle: {0} .opuzzle_setup 63dc36329331e9ebb264d652e4aa7668 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760 standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2 standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f standalone.application.boinc.Puzzle: {0} .odensity 2623d2e59a1a54916b9ecf64c933086a standalone.application.boinc.Puzzle: {0} .opdb ff85367da1b664a03b7882e858e56358 standalone.application.boinc.Puzzle: {0} .opuzzle_setup beba35efb5c3dc08b28f827c509250d8 standalone.application.boinc.Puzzle: {0} .owts 176403f366c9d25492c31b94f83a88c2 standalone.application.boinc.Puzzle: {0} .ofilters a819701faeed43e052abdec7b8ba39f7 standalone.application.boinc.Puzzle: {0} .opdb e25df9b2269de127b198e042ae459f3e standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2 standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0 standalone.application.intro.level_util: {0} JM level version = 0 standalone.application.intro.level_util: {0} Using file: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\levels/campaign_2020.intros standalone.application.intro.level_util: {0} Using file: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\levels/educational_puzzles.intros standalone.application.intro.level_util: {0} Using file: cmp-resources-2eef38e6ee152935304bce03020ae9d9\resources\levels/endless_puzzles.intros game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_completions interactive.util.options_dict: {0} Saving options file game.application.GameApplication: {0} bad file checksums, refreshing from server... game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle standalone.application.boinc.Puzzle: {0} .ofilters b96999c82b7370e8d9cedea0fe80f3a6 standalone.application.boinc.Puzzle: {0} .opdb 5c1466758b5afcebde9357f02a2277a2 standalone.application.boinc.Puzzle: {0} .opuzzle_setup b01cebc591e0b44ec7ded089c6c2ffd5 standalone.application.boinc.Puzzle: {0} .osmiles_queue 205dece35101dd46cfa91ef8fd5197f0 standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee standalone.application.boinc.Puzzle: {0} .params 7ad2f2e393cc8d9272da9e84baa73148 standalone.application.boinc.Puzzle: {0} has key .owts standalone.application.boinc.Puzzle: {0} has key .params standalone.application.boinc.Puzzle: {0} has key .opdb standalone.application.boinc.Puzzle: {0} has key .opuzzle_setup standalone.application.boinc.Puzzle: {0} has key .ofilters standalone.application.boinc.Puzzle: {0} has key .osmiles_queue interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} This software uses the Torsion Library jointly developed by the University of Hamburg, Center for Bioinformatics, Hamburg, Germany and F. Hoffmann-La-Roche Ltd., Basel, Switzerland. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [CX4:1][CX4H2:2]!@[NX3;"N_lp":3][CX4:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4H2:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3H1;"N_lp":3][!#1:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3]@[Cr3] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [c:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule. interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule. standalone.application.boinc.Puzzle: {0} starting score : -506.252 standalone.application.boinc.Puzzle: {0} puzzle loaded interactive.rosetta_util.rosetta_util: {0} ************************************************** interactive.rosetta_util.rosetta_util: {0} WARNING: residue 166 atom 1 stub atoms nearly colinear at 179.609 degrees interactive.rosetta_util.rosetta_util: {0} ************************************************** standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave.ir_solution loaded. game.application.GameApplication: {0} Loading puzzle 2013699 standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-best.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-recentbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-creditbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-best-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-recentbest-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-best-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-recentbest-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-creditbest.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-best-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-recentbest-improver.ir_solution loaded. standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013699/0000476462/default/autosave-creditbest.ir_solution loaded. interactive.application.actions.loop_hash_utils: {0} building library...interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.534s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.519s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.535s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.518s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.544s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 0.55s to generate 15 conformers for LG_5006: [H]c1c(C([H])([H])[H])noc1C([H])([H])n1c([H])nc2c(N([H])[H])nc(N([H])[H])nc21 interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 1.184s to generate 15 conformers for LG_5002: [H]O[C@]1([H])[C@@]2([H])N(c3c([H])c([H])c(C#N)c([H])c3F)C([H])([H])[C@@]3([H])C([H])([H])[C@]1([H])C([H])([H])[C@]32[H] interactive.application.actions.loop_hash_utils: {0} done. standalone.application.StandaloneApplication: {0} conditions are enabled standalone.application.TitlePanel: {0} TitlePanel new session standalone.application.ScorePanel: {0} ScorePanel new session standalone.application.ViewOptionsPanelButton: {0} ViewOptionsPanelButton new session standalone.application.HelpPanelButton: {0} HelpPanelButton new session standalone.application.ActionOptionsPanelButton: {0} ActionOptionsPanelButton new session standalone.application.UndoPanelButton: {0} UndoPanelButton new session standalone.application.CookbookPanelButton: {0} CookbookPanelButton new session standalone.application.HamburgerPanelButton: {0} HamburgerPanelButton new session interactive.application.appposeview.ElectronDensityGeom: {0} clear density... game.application.server.PrereleaseDialog: {0} PHASE PRE? : 0 game.application.server.PrereleaseDialog: {0} Normal game.application.server.PrereleaseDialog: {0} PreRelease game.application.server.CurlFetcher: {0} https://fold.it/api/get_solutions game.application.server.CurlFetcher: {0} https://fold.it/api/get_recipes game.application.GameApplication: {0} GROUP CHAT CHANNEL: AnthropicDreams game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores game.application.server.CurlFetcher: {0} https://fold.it/api/get_irc_server game.application.GameApplication: {0} BOINC says connect to: irc.fold.it:6667 game.application.GameApplication: {0} Using nick: LociOiling game.util.IRC: {0} IRC::disconnect game.util.IRC: {0} IRC::connect game.application.GameApplication: {0} Ended Initialization of GameApplication game.util.IRC: {0} IRC::connect connecting game.util.IRC: {0} Entering IRC::run standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLigandQueue interactive.application.shared.tool_util: {0} RT: 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLigandQueue game.util.IRC: {0} IRC::run recv error game.util.IRC: {0} Exiting IRC::run standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionLigandQueue interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionLigandQueue interactive.application.shared.tool_util: {0} RT: 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 [14:31:43] Molecule does not have explicit Hs. Consider calling AddHs() interactive.application.actions.ligand.ActionLigandQueue: {0} trying to add hydrogens [14:31:44] Molecule does not have explicit Hs. Consider calling AddHs() interactive.application.actions.ligand_util: {0} Attempting to find the MCS of N#Cc1ccc(N2C[C@H]3C[C@@H]4C[C@H]3[C@H]2[C@H]4O)c(F)c1 and [H][C@]12CN(C(=O)CCC(C)(C)C(=O)N3C[C@@]4([H])[C@@]([H])(C3)[C@]4([H])C(F)(F)F)C[C@@]1([H])[C@]2([H])C(F)(F)F interactive.application.actions.ligand_util: {0} Found 4 and 3 possible mappings. interactive.application.actions.ligand_util: {0} With a MCS of [#6]-[#6](:,-[#6]:,-[#6]:,-[#6]-[#7]1-[#6]-[#6]-[#6](-[#6]-1)-[#6]-[#6]):,-[#6] interactive.application.actions.ligand_util: {0} Designed Residue: [H]C([H])([H])C(C(=O)N1C([H])([H])[C@]2([H])[C@@]([H])(C(F)(F)F)[C@]2([H])C1([H])[H])(C([H])([H])[H])C([H])([H])C([H])([H])C(=O)N1C([H])([H])[C@]2([H])[C@@]([H])(C(F)(F)F)[C@]2([H])C1([H])[H] core.chemical.ResidueTypeSet: {0} [ WARNING ] ResidueType LG_5009 of mode fa_standard is being added to a ResidueTypeSet of mode centroid interactive.application.actions.ligand_util: {0} replacing residue interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 3.386s to generate 20 conformers for LG_5009: [H]C([H])([H])C(C(=O)N1C([H])([H])[C@]2([H])[C@@]([H])(C(F)(F)F)[C@]2([H])C1([H])[H])(C([H])([H])[H])C([H])([H])C([H])([H])C(=O)N1C([H])([H])[C@]2([H])[C@@]([H])(C(F)(F)F)[C@]2([H])C1([H])[H] [14:31:58] Molecule does not have explicit Hs. Consider calling AddHs() interactive.application.actions.ligand.ActionLigandQueue: {0} trying to add hydrogens interactive.application.actions.ligand_util: {0} Attempting to find the MCS of N#Cc1ccc(N2C[C@H]3C[C@@H]4C[C@H]3[C@H]2[C@H]4O)c(F)c1 and [H]N1C=CC=C1C=CC(=O)O[C@@]1([H])CS(=O)(=O)C[C@]1([H])OC(=O)C=CC1=CC=CN1[H] interactive.application.actions.ligand_util: {0} Found 3 and 2 possible mappings. interactive.application.actions.ligand_util: {0} With a MCS of [#6]-[#6]-[#6](-[#6])-[#8] interactive.application.actions.ligand_util: {0} Designed Residue: [H]C(C(=O)O[C@@]1([H])C([H])([H])S(=O)(=O)C([H])([H])[C@]1([H])OC(=O)C([H])=C([H])c1c([H])c([H])c([H])n1[H])=C([H])c1c([H])c([H])c([H])n1[H] core.chemical.ResidueTypeSet: {0} [ WARNING ] ResidueType LG_50010 of mode fa_standard is being added to a ResidueTypeSet of mode centroid interactive.application.actions.ligand_util: {0} replacing residue interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 2.812s to generate 20 conformers for LG_50010: [H]C(C(=O)O[C@@]1([H])C([H])([H])S(=O)(=O)C([H])([H])[C@]1([H])OC(=O)C([H])=C([H])c1c([H])c([H])c([H])n1[H])=C([H])c1c([H])c([H])c([H])n1[H] [14:32:09] Molecule does not have explicit Hs. Consider calling AddHs() interactive.application.actions.ligand.ActionLigandQueue: {0} trying to add hydrogens interactive.application.actions.ligand_util: {0} Attempting to find the MCS of N#Cc1ccc(N2C[C@H]3C[C@@H]4C[C@H]3[C@H]2[C@H]4O)c(F)c1 and CC1=NOC(C)=C1CCC(=O)NCC1=CN=C(O)N=C1O interactive.application.actions.ligand_util: {0} Found 5 and 1 possible mappings. interactive.application.actions.ligand_util: {0} With a MCS of [#6](:,-[#6]:,-[#6]:,-[#6]-[#7]-[#6]-[#6]-[#6]):,-[#6]:,-[#6] core.chemical.icoor_support: {0} [ WARNING ] Resetting the ICOORD invalidated some CHI entries - recomputing. interactive.application.actions.ligand_util: {0} Designed Residue: [H]Oc1nc([H])c(C([H])([H])N([H])C(=O)C([H])([H])C([H])([H])c2c(C([H])([H])[H])onc2C([H])([H])[H])c(O[H])n1 core.chemical.ResidueTypeSet: {0} [ WARNING ] ResidueType LG_50011 of mode fa_standard is being added to a ResidueTypeSet of mode centroid interactive.application.actions.ligand_util: {0} replacing residue interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 1.069s to generate 20 conformers for LG_50011: [H]Oc1nc([H])c(C([H])([H])N([H])C(=O)C([H])([H])C([H])([H])c2c(C([H])([H])[H])noc2C([H])([H])[H])c(O[H])n1 [14:32:49] Molecule does not have explicit Hs. Consider calling AddHs() interactive.application.actions.ligand.ActionLigandQueue: {0} trying to add hydrogens interactive.application.actions.ligand_util: {0} Attempting to find the MCS of N#Cc1ccc(N2C[C@H]3C[C@@H]4C[C@H]3[C@H]2[C@H]4O)c(F)c1 and [H]N1C(N)=NC2=C1C=C(C1=CC=C3OC(C)C(=O)NC3=C1)C(C)=C2 interactive.application.actions.ligand_util: {0} Found 4 and 1 possible mappings. interactive.application.actions.ligand_util: {0} With a MCS of [#6]:,-[#6]:,-[#6]-[#7]-[#6]-[#6]-[#8] interactive.application.actions.ligand_util: {0} Designed Residue: [H]c1c2O[C@@]([H])(C([H])([H])[H])C(=O)N([H])c2c([H])c(-c2c([H])c3c(nc(N([H])[H])n3[H])c([H])c2C([H])([H])[H])c1[H] core.chemical.ResidueTypeSet: {0} [ WARNING ] ResidueType LG_50012 of mode fa_standard is being added to a ResidueTypeSet of mode centroid interactive.application.actions.ligand_util: {0} replacing residue interactive.rosetta_util.ligand.ThreadedRDKitRotamerLibrarySpecification: {0} It took 1.023s to generate 15 conformers for LG_50012: [H]c1c([H])c(-c2c(C([H])([H])[H])c([H])c3nc(N([H])[H])n([H])c3c2[H])c([H])c2c1O[C@@]([H])(C([H])([H])[H])C(=O)N2[H] interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** ENDING THREAD ActionLigandQueue interactive.util.options_dict: {0} Saving options file standalone.application.boinc.Puzzle: {0} has key .owts standalone.application.boinc.Puzzle: {0} has key .opdb standalone.application.boinc.Puzzle: {0} has key .opuzzle_setup standalone.application.boinc.Puzzle: {0} has key .ofilters standalone.application.boinc.Puzzle: {0} starting score : 253.254 standalone.application.boinc.Puzzle: {0} puzzle loaded game.application.GameApplication: {0} Loading puzzle 2013711 standalone.application.StandaloneApplication: {0} conditions are enabled standalone.application.TitlePanel: {0} TitlePanel new session standalone.application.ScorePanel: {0} ScorePanel new session standalone.application.ViewOptionsPanelButton: {0} ViewOptionsPanelButton new session standalone.application.HelpPanelButton: {0} HelpPanelButton new session standalone.application.ActionOptionsPanelButton: {0} ActionOptionsPanelButton new session standalone.application.UndoPanelButton: {0} UndoPanelButton new session standalone.application.CookbookPanelButton: {0} CookbookPanelButton new session standalone.application.HamburgerPanelButton: {0} HamburgerPanelButton new session interactive.application.appposeview.ElectronDensityGeom: {0} clear density... game.application.server.PrereleaseDialog: {0} PHASE PRE? : 0 game.application.server.PrereleaseDialog: {0} Normal game.application.server.PrereleaseDialog: {0} PreRelease UNHANDLED EXCEPTION ****** Encountered Crash at Unknown File:0 Unknown Exception 1: core::pose::Pose::residue_type +16 bytes (no line) 2: interactive::application::shared::ligand_panel::LigandPanelProperties::get_rdkit_properties +278 bytes (no line) 3: interactive::application::shared::ligand_panel::LigandPanelProperties::update_properties_tree +500 bytes (no line) 4: interactive::application::shared::ligand_panel::LigandPanelProperties::update +218 bytes (no line) 5: interactive::gui::Container::update +156 bytes (no line) 6: interactive::gui::TopLevel::update +2373 bytes (no line) 7: interactive::gui::GUISystem::update +183 bytes (no line) 8: interactive::guiwrapper::GUIWrapper::tick_frame +123 bytes (no line) 9: interactive::guiwrapper::win32::Win32Wrapper::force_refresh +14 bytes (no line) 10: interactive::gui::LoadingDialogHolder::LoadingDialogHolder +363 bytes (no line) 11: game::application::AlphaFoldDialog::refresh_solutions_list +557 bytes (no line) 12: game::application::AlphaFoldDialog::refresh_dialog +1114 bytes (no line) 13: game::application::AlphaFoldDialog::app_obs_new_session +1115 bytes (no line) 14: boost::detail::function::void_function_obj_invoker1,boost::_bi::list2,boost::arg<1> > >,void,interactive::application::shared::ApplicationEvent>::invoke +22 bytes (no line) 15: utility::signals::SignalHub::send_signal +235 bytes (no line) 16: utility::signals::SignalHub::operator() +90 bytes (no line) 17: interactive::application::shared::ToolApplication::notify_observers +42 bytes (no line) 18: standalone::application::StandaloneApplication::setup_for_puzzle +13180 bytes (no line) 19: game::application::GameApplication::setup_for_puzzle +1656 bytes (no line) 20: game::application::GameApplication::choose_new_puzzle +2582 bytes (no line) 21: interactive::util::detail::checked_fxn_wrapper::operator() +337 bytes (no line) 22: boost::detail::function::void_function_obj_invoker0,boost::_bi::list2 >,boost::_bi::value > >,void>::invoke +70 bytes (no line) 23: game::application::PuzzleSelectionManager::on_confirm_puzzle +82 bytes (no line) 24: game::application::PuzzleSelectionManager::select_and_confirm_puzzle +758 bytes (no line) 25: game::application::PuzzleSelectionManager::puzzle_select_menu_callback +54 bytes (no line) 26: interactive::util::detail::checked_fxn_wrapper::operator() +440 bytes (no line) 27: boost::detail::function::void_function_obj_invoker0,boost::_bi::list1 > > >,void>::invoke +66 bytes (no line) 28: interactive::gui::PuzzleSelectMenu::click_selected +51 bytes (no line) 29: interactive::gui::Button::on_mouse_up +114 bytes (no line) 30: interactive::gui::TopLevel::on_mouse_up +179 bytes (no line) 31: interactive::guiwrapper::GUIWrapper::generic_mouse_button_func +519 bytes (no line) 32: interactive::util::detail::checked_fxn_wrapper::operator() +371 bytes (no line) 33: boost::detail::function::void_function_obj_invoker0,boost::_bi::list5 >,boost::_bi::value,boost::_bi::value,boost::_bi::value,boost::_bi::value > >,void>::invoke +92 bytes (no line) 34: interactive::guiwrapper::GUIWrapper::enqueue_event +82 bytes (no line) 35: interactive::guiwrapper::win32::Win32Wrapper::win_mouse_button_func +470 bytes (no line) 36: interactive::guiwrapper::win32::Win32Wrapper::WndProc +1618 bytes (no line) 37: DispatchMessageW +1857 bytes (no line) 38: CallWindowProcW +139 bytes (no line) 39: wglSwapBuffers +1092 bytes (no line) 40: DispatchMessageW +1857 bytes (no line) 41: DispatchMessageW +513 bytes (no line) 42: interactive::guiwrapper::win32::Win32Wrapper::start +328 bytes (no line) 43: interactive::application::interactive_main +3254 bytes (no line) 44: game::application::game_main +2218 bytes (no line) 45: no symbol (no line) 46: no symbol (no line) 47: no symbol (no line) 48: BaseThreadInitThunk +29 bytes (no line) 49: RtlUserThreadStart +40 bytes (no line) ... 1: core::pose::Pose::residue_type +16 bytes (no line) 2: interactive::application::shared::ligand_panel::LigandPanelProperties::get_rdkit_properties +278 bytes (no line) 3: interactive::application::shared::ligand_panel::LigandPanelProperties::update_properties_tree +500 bytes (no line) 4: interactive::application::shared::ligand_panel::LigandPanelProperties::update +218 bytes (no line) 5: interactive::gui::Container::update +156 bytes (no line) 6: interactive::gui::TopLevel::update +2373 bytes (no line) 7: interactive::gui::GUISystem::update +183 bytes (no line) 8: interactive::guiwrapper::GUIWrapper::tick_frame +123 bytes (no line) 9: interactive::guiwrapper::win32::Win32Wrapper::force_refresh +14 bytes (no line) 10: interactive::gui::LoadingDialogHolder::LoadingDialogHolder +363 bytes (no line) 11: game::application::AlphaFoldDialog::refresh_solutions_list +557 bytes (no line) 12: game::application::AlphaFoldDialog::refresh_dialog +1114 bytes (no line) 13: game::application::AlphaFoldDialog::app_obs_new_session +1115 bytes (no line) 14: boost::detail::function::void_function_obj_invoker1,boost::_bi::list2,boost::arg<1> > >,void,interactive::application::shared::ApplicationEvent>::invoke +22 bytes (no line) 15: utility::signals::SignalHub::send_signal +235 bytes (no line) 16: utility::signals::SignalHub::operator() +90 bytes (no line) 17: interactive::application::shared::ToolApplication::notify_observers +42 bytes (no line) 18: standalone::application::StandaloneApplication::setup_for_puzzle +13180 bytes (no line) 19: game::application::GameApplication::setup_for_puzzle +1656 bytes (no line) 20: game::application::GameApplication::choose_new_puzzle +2582 bytes (no line) 21: interactive::util::detail::checked_fxn_wrapper::operator() +337 bytes (no line) 22: boost::detail::function::void_function_obj_invoker0,boost::_bi::list2 >,boost::_bi::value > >,void>::invoke +70 bytes (no line) 23: game::application::PuzzleSelectionManager::on_confirm_puzzle +82 bytes (no line) 24: game::application::PuzzleSelectionManager::select_and_confirm_puzzle +758 bytes (no line) 25: game::application::PuzzleSelectionManager::puzzle_select_menu_callback +54 bytes (no line) 26: interactive::util::detail::checked_fxn_wrapper::operator() +440 bytes (no line) 27: boost::detail::function::void_function_obj_invoker0,boost::_bi::list1 > > >,void>::invoke +66 bytes (no line) 28: interactive::gui::PuzzleSelectMenu::click_selected +51 bytes (no line) 29: interactive::gui::Button::on_mouse_up +114 bytes (no line) 30: interactive::gui::TopLevel::on_mouse_up +179 bytes (no line) 31: interactive::guiwrapper::GUIWrapper::generic_mouse_button_func +519 bytes (no line) 32: interactive::util::detail::checked_fxn_wrapper::operator() +371 bytes (no line) 33: boost::detail::function::void_function_obj_invoker0,boost::_bi::list5 >,boost::_bi::value,boost::_bi::value,boost::_bi::value,boost::_bi::value > >,void>::invoke +92 bytes (no line) 34: interactive::guiwrapper::GUIWrapper::enqueue_event +82 bytes (no line) 35: interactive::guiwrapper::win32::Win32Wrapper::win_mouse_button_func +470 bytes (no line) 36: interactive::guiwrapper::win32::Win32Wrapper::WndProc +1618 bytes (no line) 37: DispatchMessageW +1857 bytes (no line) 38: CallWindowProcW +139 bytes (no line) 39: wglSwapBuffers +1092 bytes (no line) 40: DispatchMessageW +1857 bytes (no line) 41: DispatchMessageW +513 bytes (no line) 42: interactive::guiwrapper::win32::Win32Wrapper::start +328 bytes (no line) 43: interactive::application::interactive_main +3254 bytes (no line) 44: game::application::game_main +2218 bytes (no line) 45: no symbol (no line) 46: no symbol (no line) 47: no symbol (no line) 48: BaseThreadInitThunk +29 bytes (no line) 49: RtlUserThreadStart +40 bytes (no line) ...