20221025-f438000f5b-win_x64-devprev puzzle cannot wiggle at INITIAL PUZZLE LOAD (repeatable)

[Bletchley Park]

Load my shared solution for 2219 "crashable_when_wiggling" in a windows devprev client and just wiggle. (repeatable)

@rmoretti
@bkoep
BUG BUG BUG BUG BUG

args passed:
'E:\foldit_64\Foldit\Foldit.exe'
args used:
'E:\foldit_64\Foldit\Foldit.exe'
'-resources'
'cmp-resources-a8874483441c334929e452a34d38bbad/resources'
'-database'
'cmp-database-301fa8f1694a5a3f928584afe65c4af5/database'
'-interactive_game'
'novice'
'-interactive:interactive_residue_types'
'-ignore_unrecognized_res'
'-in::use_truncated_termini'
'-out:levels'
'all:warning'
'interactive:info'
'standalone:info'
'game:info'
'-out:no_color'
'-load_PDB_components'
'false'
interactive.util.options_dict: {0} Loading options file
standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files
standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files
game.application.GameApplication: {0} Initializing
game.application.server.CurlFetcher: {0} https://fold.it/api/post_crash_report
interactive.sound/SoundTheme: {0} SoundTheme::load: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_00.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_01.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_02.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_03.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_04.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_05.ogg
standalone.application.StandaloneApplication: {0} (@init_machine_log)intro_level_version_ is 0
interactive.util.options_dict: {0} We're loading in the hotkeys
interactive.util.options_dict: {0} We loaded in the hotkeys
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} SVM classifier successfully loaded
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Feature list successfully loaded
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Valid classifier feature list
interactive.remote.RemoteThread: {0} REMOTE Local Address: [unnecessary to post my internal IP address !]
interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_UNDO_ALT to hotkey [Ctrl+Z] - hotkey is already bound to UNDO_UNDO
interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_REDO_ALT to hotkey [Ctrl+Y] - hotkey is already bound to UNDO_REDO
standalone.application.StandaloneApplication: {0} about to create view_options_button_
interactive.application.shared.HotkeyTable: {0} Could not bind ACTION_INSERT_RESIDUE to hotkey [I] - hotkey is already bound to UNDO_RESTORE_BEST_CREDIT
interactive.application.shared.ToolApplication: {0} setting side chain mode to: 2 Show All (Slow)
interactive.remote.RemoteDialog: {0} Found remote enable option: 0
game.application.AlphaFoldDialog: {0} POS UDim< rel:0 abs:541 self:0 >:UDim< rel:0 abs:-15.5 self:0 >
game.application.server.Updater: {0} checking updates…
game.application.server.CurlFetcher: {0} https://fold.it/api/get_update_components
game.application.server.Updater: {0} binary
game.application.server.Updater: {0} local: '0f97fbfc9ee0972288ffa6771cbe0f0d'
game.application.server.Updater: {0} remote: '0f97fbfc9ee0972288ffa6771cbe0f0d'
game.application.server.Updater: {0} database
game.application.server.Updater: {0} local: '301fa8f1694a5a3f928584afe65c4af5'
game.application.server.Updater: {0} remote: '301fa8f1694a5a3f928584afe65c4af5'
game.application.server.Updater: {0} resources
game.application.server.Updater: {0} local: 'a8874483441c334929e452a34d38bbad'
game.application.server.Updater: {0} remote: 'a8874483441c334929e452a34d38bbad'
game.application.server.Updater: {0} cleaning up old components:
game.application.server.Updater: {0} binary 0f97fbfc9ee0972288ffa6771cbe0f0d
game.application.server.Updater: {0} database 301fa8f1694a5a3f928584afe65c4af5
game.application.server.Updater: {0} resources a8874483441c334929e452a34d38bbad
game.application.server.CurlFetcher: {0} https://fold.it/api/get_news
standalone.application.StandaloneApplication: {0} Show splash!
standalone.application.StandaloneApplication: {0} Playing: sounds/organic_01/splashscreen.ogg
standalone.application.StandaloneApplication: {0} Converting any old-style quicksaves and autosaves…
standalone.application.GeneralOptionsPanel: {0} buildid: 20221025-f438000f5b-win_x64-devprev
game.application.GameApplication: {0} Ended pre-login init
game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info
game.application.GameApplication: {0} Logged in with player ID: [no need to display my player ID in a bugreport]
game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4
standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 5c51b2b67fcf8faee13c90e712ddc0da
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ocnstr 238d1d9c612a3094b76c6c6b5f773999
standalone.application.boinc.Puzzle: {0} .ofilters f0b2135fd338ec0f85258c3b947986ee
standalone.application.boinc.Puzzle: {0} .opdb 4875953bd64c98f7f49f924f224d98cc
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 862550b9d8caabeeb65ecb4e906366d8
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .roscript c5f14757771ee80e4e2ddec1f6196c3f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters 76cb2f46e0682324749edfeefb9edaaf
standalone.application.boinc.Puzzle: {0} .opdb 67c7df53fd8075e7f75d24fea83f4b6f
standalone.application.boinc.Puzzle: {0} .opuzzle_setup c119339b5037a7ade3c79c317a9e4fb6
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params c955a99af2bf2f4a188fb1f4f5eea9f2
standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a
standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633
standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ofilters 7963e206d01e285ae3359d4ce20cae89
standalone.application.boinc.Puzzle: {0} .opdb 19ab18c6a1430e39ad01f2c1d9453565
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 083c464bfabcacb95ef37dc47dcba6e0
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .params 4510ec334d0aa1934df8c65726677aac
standalone.application.boinc.Puzzle: {0} .opdb 197be3cc880c828b2c022e7c223b6c35
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params 2ae5427bff7f93b393011a447f6b592c
standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
BoincObject Error reading "0002013467.ir_puzzle".
Unknown enum value for shared::StandaloneSessionConfig::Phase: AllHands. (C:\Users\jflat06\foldit\develop\source\src\interactive\util\EnumMapping.hh:63)
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4
standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 5c51b2b67fcf8faee13c90e712ddc0da
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ocnstr 238d1d9c612a3094b76c6c6b5f773999
standalone.application.boinc.Puzzle: {0} .ofilters f0b2135fd338ec0f85258c3b947986ee
standalone.application.boinc.Puzzle: {0} .opdb 4875953bd64c98f7f49f924f224d98cc
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 862550b9d8caabeeb65ecb4e906366d8
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .roscript c5f14757771ee80e4e2ddec1f6196c3f
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters 76cb2f46e0682324749edfeefb9edaaf
standalone.application.boinc.Puzzle: {0} .opdb 67c7df53fd8075e7f75d24fea83f4b6f
standalone.application.boinc.Puzzle: {0} .opuzzle_setup c119339b5037a7ade3c79c317a9e4fb6
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params c955a99af2bf2f4a188fb1f4f5eea9f2
standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a
standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633
standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ofilters 7963e206d01e285ae3359d4ce20cae89
standalone.application.boinc.Puzzle: {0} .opdb 19ab18c6a1430e39ad01f2c1d9453565
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 083c464bfabcacb95ef37dc47dcba6e0
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .params 4510ec334d0aa1934df8c65726677aac
standalone.application.boinc.Puzzle: {0} .opdb 197be3cc880c828b2c022e7c223b6c35
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params 2ae5427bff7f93b393011a447f6b592c
standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.intro.level_util: {0} JM level version = 0
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/campaign_2020.intros
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/educational_puzzles.intros
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/endless_puzzles.intros
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_completions
game.application.GameApplication: {0} bad file checksums, refreshing from server…
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params b8ef60b71ed9f10453e6518d92475a97
standalone.application.boinc.Puzzle: {0} has key .owts
standalone.application.boinc.Puzzle: {0} has key .params
standalone.application.boinc.Puzzle: {0} has key .opdb
standalone.application.boinc.Puzzle: {0} has key .opuzzle_setup
standalone.application.boinc.Puzzle: {0} has key .ofilters
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/bi.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[#6]=C-O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[#6]=C-N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[OH]-C-[OH].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/OCC[OH].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C(=S).smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C=C-C=O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-;!@O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-;!@N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N=!@C.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[!r;C]=[!r;C][!r;C]=[!r;C].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[!r;C]#[!r;C][!r;C]#[!r;C].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[c,n;!R1&!R2].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-c.N-c.N-c.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[r4]=[r4].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/a:a:a:a:a:a:a:a:a:a:a.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[A;H1,H2]1-A=A-A=A1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/A=A1-A=A-A(=A)-[A;H1,H2]1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[C;H1,H2]1-A=A-A(=A)-A=A1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[A;H1,H2]1-A=A-A=A-[A;H1,H2]1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C#C.smi'
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} This software uses the Torsion Library jointly developed by the University of Hamburg, Center for Bioinformatics, Hamburg, Germany and F. Hoffmann-La-Roche Ltd., Basel, Switzerland.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [CX4:1][CX4H2:2]!@[NX3;"N_lp":3][CX4:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4H2:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3H1;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3]@[Cr3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [c:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
standalone.application.boinc.Puzzle: {0} starting score : -818.31
standalone.application.boinc.Puzzle: {0} puzzle loaded
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave.ir_solution loaded.
game.application.GameApplication: {0} Loading puzzle 2013502
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.application.actions.loop_hash_utils: {0} building library…interactive.application.actions.loop_hash_utils: {0} done.
standalone.application.StandaloneApplication: {0} conditions are enabled
standalone.application.TitlePanel: {0} TitlePanel new session
standalone.application.ScorePanel: {0} ScorePanel new session
standalone.application.ViewOptionsPanelButton: {0} ViewOptionsPanelButton new session
standalone.application.HelpPanelButton: {0} HelpPanelButton new session
standalone.application.ActionOptionsPanelButton: {0} ActionOptionsPanelButton new session
standalone.application.UndoPanelButton: {0} UndoPanelButton new session
standalone.application.CookbookPanelButton: {0} CookbookPanelButton new session
standalone.application.HamburgerPanelButton: {0} HamburgerPanelButton new session
interactive.application.appposeview.ElectronDensityGeom: {0} clear density…
game.application.server.PrereleaseDialog: {0} PHASE PRE? : 0
game.application.server.PrereleaseDialog: {0} Normal
game.application.server.PrereleaseDialog: {0} PreRelease
game.application.server.CurlFetcher: {0} https://fold.it/api/get_solutions
game.application.server.CurlFetcher: {0} https://fold.it/api/get_recipes
game.application.GameApplication: {0} GROUP CHAT CHANNEL: Contenders
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_irc_server
game.application.GameApplication: {0} BOINC says connect to: irc.fold.it:6667
game.application.GameApplication: {0} Using nick: Bletchley_Park
game.util.IRC: {0} IRC::disconnect
game.util.IRC: {0} IRC::connect
game.application.GameApplication: {0} Ended Initialization of GameApplication
game.util.IRC: {0} IRC::connect connecting
game.util.IRC: {0} Entering IRC::run
game.util.IRC: {0} IRC::run connected
game.application.IRCThread: {0} Notice : This nickname is registered and protected. If it is your game.application.IRCThread: {0} Notice : nick, type /msg NickServ IDENTIFY password. Otherwise, game.application.IRCThread: {0} Notice : please choose a different nick. game.application.IRCThread: {0} Notice : Password accepted - you are now recognized. game.application.IRCThread: {0} IDENTIFIED game.util.IRC: {0} Joined IRC channel #global game.util.IRC: {0} Joined IRC channel #veteran game.util.IRC: {0} Joined IRC channel #contenders game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.LoadSaveDialog: {0} No object matching key 0. game.application.server.CurlFetcher: {0} https://fold.it/api/get_solutions standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionDualSpaceGlobalMinimize interactive.application.shared.tool_util: {0} RT: 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 core.scoring.hbonds.hbonds_geom: {0} [ ERROR ] NAN occurred in H-bonding calculations! core.scoring.hbonds.hbonds_geom: {0} [ ERROR ] Dxyz NAN NAN NAN Hxyz -NAN(IND) -NAN(IND) -NAN(IND) BACKTRACE: 1: c10::ivalue::Future::waitAndThrow +48373716 bytes (no line) 2: c10::ivalue::Future::waitAndThrow +38082139 bytes (no line) 3: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line) 4: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line) 5: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line) 6: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line) 7: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line) 8: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line) 9: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line) 10: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line) 11: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line) 12: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line) 13: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line) 14: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line) 15: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line) 16: c10::ivalue::Future::waitAndThrow +725417 bytes (no line) 17: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line) 18: library_main +5087016 bytes (no line) 19: library_main +5102482 bytes (no line) 20: library_main +4188365 bytes (no line) 21: library_main +4188561 bytes (no line) 22: BaseThreadInitThunk +13 bytes (no line) 23: RtlUserThreadStart +33 bytes (no line)

UNHANDLED EXCEPTION
** Encountered Crash at Unknown File:0
Unknown Exception
1: RaiseException +61 bytes (no line)
2: xmlXIncludeSetFlags +525012 bytes (no line)
3: c10::ivalue::Future::waitAndThrow +38083864 bytes (no line)
4: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line)
5: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line)
6: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line)
7: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line)
8: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line)
9: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line)
10: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line)
11: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line)
12: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line)
13: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line)
14: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line)
15: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line)
16: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line)
17: c10::ivalue::Future::waitAndThrow +725417 bytes (no line)
18: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line)
19: library_main +5087016 bytes (no line)
20: library_main +5102482 bytes (no line)
21: library_main +4188365 bytes (no line)
22: library_main +4188561 bytes (no line)
23: BaseThreadInitThunk +13 bytes (no line)
24: RtlUserThreadStart +33 bytes (no line)

1: RaiseException +61 bytes (no line)
2: xmlXIncludeSetFlags +525012 bytes (no line)
3: c10::ivalue::Future::waitAndThrow +38083864 bytes (no line)
4: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line)
5: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line)
6: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line)
7: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line)
8: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line)
9: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line)
10: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line)
11: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line)
12: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line)
13: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line)
14: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line)
15: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line)
16: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line)
17: c10::ivalue::Future::waitAndThrow +725417 bytes (no line)
18: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line)
19: library_main +5087016 bytes (no line)
20: library_main +5102482 bytes (no line)
21: library_main +4188365 bytes (no line)
22: library_main +4188561 bytes (no line)
23: BaseThreadInitThunk +13 bytes (no line)
24: RtlUserThreadStart +33 bytes (no line)

[bkoep]

This seems to be an issue with corrupted atom coordinates—more discussion here.

[Bletchley Park]

I loaded the initial puzzle again with a slightly different starting score of close to minus 1 million (odd !) and wiggled, this is the resulting log file.
Resetting the puzzle using "Undo menu, Reset puzzle, Yes" resets the puzzle to a usable state with a starting score of 16183. That might give you a clue as to where this fails in the initial loading.

1args passed:
'E:\foldit_64\Foldit\Foldit.exe'
args used:
'E:\foldit_64\Foldit\Foldit.exe'
'-resources'
'cmp-resources-a8874483441c334929e452a34d38bbad/resources'
'-database'
'cmp-database-301fa8f1694a5a3f928584afe65c4af5/database'
'-interactive_game'
'novice'
'-interactive:interactive_residue_types'
'-ignore_unrecognized_res'
'-in::use_truncated_termini'
'-out:levels'
'all:warning'
'interactive:info'
'standalone:info'
'game:info'
'-out:no_color'
'-load_PDB_components'
'false'
interactive.util.options_dict: {0} Loading options file
standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files
standalone.application.StandaloneViewPresetList: {0} StandaloneViewPresetList->load_preset_files(): successfully loaded view preset files
game.application.GameApplication: {0} Initializing
interactive.sound/SoundTheme: {0} SoundTheme::load: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_00.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_01.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_02.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_03.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_04.ogg
interactive.sound/SoundTheme: {0} loading: cmp-resources-a8874483441c334929e452a34d38bbad\resources\sounds/organic_01/rotamer_land_05.ogg
standalone.application.StandaloneApplication: {0} (@init_machine_log)intro_level_version_ is 0
interactive.util.options_dict: {0} We're loading in the hotkeys
interactive.util.options_dict: {0} We loaded in the hotkeys
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} SVM classifier successfully loaded
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Feature list successfully loaded
interactive.rosetta_util.ExposedHydrophobicsCalculator: {0} Valid classifier feature list
interactive.remote.RemoteThread: {0} REMOTE Local Address: [irrelevant for others]
interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_UNDO_ALT to hotkey [Ctrl+Z] - hotkey is already bound to UNDO_UNDO
interactive.application.shared.HotkeyTable: {0} Could not bind UNDO_REDO_ALT to hotkey [Ctrl+Y] - hotkey is already bound to UNDO_REDO
standalone.application.StandaloneApplication: {0} about to create view_options_button_
interactive.application.shared.HotkeyTable: {0} Could not bind ACTION_INSERT_RESIDUE to hotkey [I] - hotkey is already bound to UNDO_RESTORE_BEST_CREDIT
interactive.application.shared.ToolApplication: {0} setting side chain mode to: 2 Show All (Slow)
interactive.remote.RemoteDialog: {0} Found remote enable option: 0
game.application.AlphaFoldDialog: {0} POS UDim< rel:0 abs:541 self:0 >:UDim< rel:0 abs:-15.5 self:0 >
game.application.server.Updater: {0} checking updates…
game.application.server.CurlFetcher: {0} https://fold.it/api/get_update_components
game.application.server.Updater: {0} binary
game.application.server.Updater: {0} local: '0f97fbfc9ee0972288ffa6771cbe0f0d'
game.application.server.Updater: {0} remote: '0f97fbfc9ee0972288ffa6771cbe0f0d'
game.application.server.Updater: {0} database
game.application.server.Updater: {0} local: '301fa8f1694a5a3f928584afe65c4af5'
game.application.server.Updater: {0} remote: '301fa8f1694a5a3f928584afe65c4af5'
game.application.server.Updater: {0} resources
game.application.server.Updater: {0} local: 'a8874483441c334929e452a34d38bbad'
game.application.server.Updater: {0} remote: 'a8874483441c334929e452a34d38bbad'
game.application.server.Updater: {0} cleaning up old components:
game.application.server.Updater: {0} binary 0f97fbfc9ee0972288ffa6771cbe0f0d
game.application.server.Updater: {0} database 301fa8f1694a5a3f928584afe65c4af5
game.application.server.Updater: {0} resources a8874483441c334929e452a34d38bbad
game.application.server.CurlFetcher: {0} https://fold.it/api/get_news
standalone.application.StandaloneApplication: {0} Show splash!
standalone.application.StandaloneApplication: {0} Playing: sounds/organic_01/splashscreen.ogg
standalone.application.StandaloneApplication: {0} Converting any old-style quicksaves and autosaves…
standalone.application.GeneralOptionsPanel: {0} buildid: 20221025-f438000f5b-win_x64-devprev
game.application.GameApplication: {0} Ended pre-login init
game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info
game.application.GameApplication: {0} Logged in with player ID: [irrelevant for anyone]
game.application.server.CurlFetcher: {0} https://fold.it/api/get_user_info
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4
standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 5c51b2b67fcf8faee13c90e712ddc0da
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters 76cb2f46e0682324749edfeefb9edaaf
standalone.application.boinc.Puzzle: {0} .opdb 67c7df53fd8075e7f75d24fea83f4b6f
standalone.application.boinc.Puzzle: {0} .opuzzle_setup c119339b5037a7ade3c79c317a9e4fb6
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params c955a99af2bf2f4a188fb1f4f5eea9f2
standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a
standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633
standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ofilters 7963e206d01e285ae3359d4ce20cae89
standalone.application.boinc.Puzzle: {0} .opdb 19ab18c6a1430e39ad01f2c1d9453565
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 083c464bfabcacb95ef37dc47dcba6e0
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .params 4510ec334d0aa1934df8c65726677aac
standalone.application.boinc.Puzzle: {0} .opdb 197be3cc880c828b2c022e7c223b6c35
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params 2ae5427bff7f93b393011a447f6b592c
standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
BoincObject Error reading "0002013467.ir_puzzle".
Unknown enum value for shared::StandaloneSessionConfig::Phase: AllHands. (C:\Users\jflat06\foldit\develop\source\src\interactive\util\EnumMapping.hh:63)
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzles
standalone.application.boinc.Puzzle: {0} .ocmdline d0c38b589470b99976db250c17c71d3d
standalone.application.boinc.Puzzle: {0} .ofilters eb8c2fc8a467c4cf237618a29c45f665
standalone.application.boinc.Puzzle: {0} .opdb a7916996dc6adb777c51f4c4a575fa84
standalone.application.boinc.Puzzle: {0} .opuzzle_setup eddf1be56eb7d97f3a0ce625e923bff7
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ocmdline e14ffdcac91bac948806a2ff7ed87ea4
standalone.application.boinc.Puzzle: {0} .opdb baf2b55ed9d608eccf6b6b91dac460d3
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 5c51b2b67fcf8faee13c90e712ddc0da
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .sym 9416a20b4855d4d4b0754de653e7dd55
standalone.application.boinc.Puzzle: {0} .opdb 2cb8ff8457d30a4bf7f2ba9e4df53760
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 9090234d1eabcc31aeb31cc118fa57e2
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .ofilters 76cb2f46e0682324749edfeefb9edaaf
standalone.application.boinc.Puzzle: {0} .opdb 67c7df53fd8075e7f75d24fea83f4b6f
standalone.application.boinc.Puzzle: {0} .opuzzle_setup c119339b5037a7ade3c79c317a9e4fb6
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params c955a99af2bf2f4a188fb1f4f5eea9f2
standalone.application.boinc.Puzzle: {0} .odensity 0ec96a8677ee654aeb9f398c35788c9a
standalone.application.boinc.Puzzle: {0} .opdb 8cb39d7c3c76080f0ce3b66d76485633
standalone.application.boinc.Puzzle: {0} .opuzzle_setup d8f3716eaf7d2d2878c34987b34c8ae4
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .owts_patch b492b64225a26b2b882d56da3585b00a
standalone.application.boinc.Puzzle: {0} .ocmdline daaa12faea0e4407f28d8beed5d5f553
standalone.application.boinc.Puzzle: {0} .ofilters 7963e206d01e285ae3359d4ce20cae89
standalone.application.boinc.Puzzle: {0} .opdb 19ab18c6a1430e39ad01f2c1d9453565
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 083c464bfabcacb95ef37dc47dcba6e0
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.boinc.Puzzle: {0} .params 4510ec334d0aa1934df8c65726677aac
standalone.application.boinc.Puzzle: {0} .opdb 197be3cc880c828b2c022e7c223b6c35
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 08586216d9939ed1b557037a98b94cc2
standalone.application.boinc.Puzzle: {0} .owts 5b16284e5e5e4f85b6793eba788a0ce0
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params 2ae5427bff7f93b393011a447f6b592c
standalone.application.boinc.Puzzle: {0} .opdb 54dba4dcebad32bcdde53965ccb21607
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 0cf734fcccc42fbe2f314ba6a61438d3
standalone.application.boinc.Puzzle: {0} .owts d2f7165a0e0f8d0203c093ba8d54267f
standalone.application.intro.level_util: {0} JM level version = 0
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/campaign_2020.intros
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/educational_puzzles.intros
standalone.application.intro.level_util: {0} Using file: cmp-resources-a8874483441c334929e452a34d38bbad\resources\levels/endless_puzzles.intros
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_completions
game.application.GameApplication: {0} bad file checksums, refreshing from server…
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle
standalone.application.boinc.Puzzle: {0} .ofilters abb7c601142ebc86c333fe6b2dedfda8
standalone.application.boinc.Puzzle: {0} .opdb 9daf915088fca2808f7f8109959b6f62
standalone.application.boinc.Puzzle: {0} .opuzzle_setup 187cee9c4e7391486a4922acb819a54b
standalone.application.boinc.Puzzle: {0} .owts b4fb927e049837a8d522d1bf29e015ee
standalone.application.boinc.Puzzle: {0} .params b8ef60b71ed9f10453e6518d92475a97
standalone.application.boinc.Puzzle: {0} has key .owts
standalone.application.boinc.Puzzle: {0} has key .params
standalone.application.boinc.Puzzle: {0} has key .opdb
standalone.application.boinc.Puzzle: {0} has key .opuzzle_setup
standalone.application.boinc.Puzzle: {0} has key .ofilters
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/bi.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[#6]=C-O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[#6]=C-N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[OH]-C-[OH].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/OCC[OH].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C(=S).smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C=C-C=O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-;!@O.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-;!@N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N=!@C.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[!r;C]=[!r;C][!r;C]=[!r;C].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[!r;C]#[!r;C][!r;C]#[!r;C].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[c,n;!R1&!R2].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-c.N-c.N-c.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[r4]=[r4].smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/a:a:a:a:a:a:a:a:a:a:a.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[A;H1,H2]1-A=A-A=A1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/A=A1-A=A-A(=A)-[A;H1,H2]1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[C;H1,H2]1-A=A-A(=A)-A=A1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/[A;H1,H2]1-A=A-A=A-[A;H1,H2]1.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/N-N.smi'
interactive.application.appfilter.LigandSubstructureFilter: {0} Looking for 'cmp-database-301fa8f1694a5a3f928584afe65c4af5\database\scoring/drug_design/substructure_penalties/C#C.smi'
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} This software uses the Torsion Library jointly developed by the University of Hamburg, Center for Bioinformatics, Hamburg, Germany and F. Hoffmann-La-Roche Ltd., Basel, Switzerland.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [CX4:1][CX4H2:2]!@[NX3;"N_lp":3][CX4:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4H2:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][CX4:2]!@[NX3;"N_lp":3][C:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3H1;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4H2:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][CX4:2]!@[NX3;"N_lp":3][!#1:4] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3]@[Cr3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [C:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [c:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
interactive.rosetta_util.ligand.RareyRotamerLibrary: {0} Ignoring torsion pattern [!#1:1][$(S(=O)=O):2]!@["N_lp":3] due to presence of N_lp rule.
standalone.application.boinc.Puzzle: {0} starting score : -818.31
standalone.application.boinc.Puzzle: {0} puzzle loaded
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave.ir_solution loaded.
game.application.GameApplication: {0} Loading puzzle 2013502
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-best.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-recentbest.ir_solution loaded.
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 1 atom 22 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 3 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 12 atom 11 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 15 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 19 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 20 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 23 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 24 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 25 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 26 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 32 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 34 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 40 atom 14 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 41 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 44 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 46 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 48 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 49 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 6 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 51 atom 7 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 53 atom 21 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 54 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 55 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 59 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 60 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 61 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 62 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 65 atom 20 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 68 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 72 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 76 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 82 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 84 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 87 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 89 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 91 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 92 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 93 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 10 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 96 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 101 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 104 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 107 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 11 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 111 atom 23 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 112 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 118 atom 23 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 119 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 120 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 3 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 121 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 122 atom 1 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 123 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 7 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 128 atom 8 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 129 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 130 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 132 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 17 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 136 atom 18 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 141 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 144 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 145 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 148 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 149 atom 19 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 152 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 169 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 170 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 171 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 172 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 175 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 178 atom 9 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 179 atom 16 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 181 atom 24 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 2 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 3 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 4 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 182 atom 13 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 186 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 187 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 188 atom 14 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 190 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 1 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 193 atom 2 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 196 atom 12 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 197 atom 4 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 8 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 199 atom 10 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 15 stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} ******************
interactive.rosetta_util.rosetta_util: {0} WARNING: residue 200 atom 29 input stub atoms nearly colinear at 180 degrees
interactive.rosetta_util.rosetta_util: {0} ******************
standalone.application.StandaloneApplication: {0} Autosave puzzles/0002013502/0000108474/default/autosave-creditbest.ir_solution loaded.
interactive.application.actions.loop_hash_utils: {0} building library…interactive.application.actions.loop_hash_utils: {0} done.
standalone.application.StandaloneApplication: {0} conditions are enabled
standalone.application.TitlePanel: {0} TitlePanel new session
standalone.application.ScorePanel: {0} ScorePanel new session
standalone.application.ViewOptionsPanelButton: {0} ViewOptionsPanelButton new session
standalone.application.HelpPanelButton: {0} HelpPanelButton new session
standalone.application.ActionOptionsPanelButton: {0} ActionOptionsPanelButton new session
standalone.application.UndoPanelButton: {0} UndoPanelButton new session
standalone.application.CookbookPanelButton: {0} CookbookPanelButton new session
standalone.application.HamburgerPanelButton: {0} HamburgerPanelButton new session
interactive.application.appposeview.ElectronDensityGeom: {0} clear density…
game.application.server.PrereleaseDialog: {0} PHASE PRE? : 0
game.application.server.PrereleaseDialog: {0} Normal
game.application.server.PrereleaseDialog: {0} PreRelease
game.application.server.CurlFetcher: {0} https://fold.it/api/get_solutions
game.application.server.CurlFetcher: {0} https://fold.it/api/get_recipes
game.application.GameApplication: {0} GROUP CHAT CHANNEL: Contenders
game.application.server.CurlFetcher: {0} https://fold.it/api/get_puzzle_scores
game.application.server.CurlFetcher: {0} https://fold.it/api/get_irc_server
game.application.GameApplication: {0} BOINC says connect to: irc.fold.it:6667
game.application.GameApplication: {0} Using nick: Bletchley_Park
game.util.IRC: {0} IRC::disconnect
game.util.IRC: {0} IRC::connect
game.application.GameApplication: {0} Ended Initialization of GameApplication
game.util.IRC: {0} IRC::connect connecting
game.util.IRC: {0} Entering IRC::run
game.util.IRC: {0} IRC::run connected
game.application.IRCThread: {0} Notice : This nickname is registered and protected. If it is your game.application.IRCThread: {0} Notice : nick, type /msg NickServ IDENTIFY password. Otherwise, game.application.IRCThread: {0} Notice : please choose a different nick. game.application.IRCThread: {0} Notice : Password accepted - you are now recognized. game.application.IRCThread: {0} IDENTIFIED game.util.IRC: {0} Joined IRC channel #global game.util.IRC: {0} Joined IRC channel #veteran game.util.IRC: {0} Joined IRC channel #contenders standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize standalone.application.MoveCountTracker: {0} Action not in MoveCountTracker map: ActionDualSpaceGlobalMinimize interactive.application.actions.cart.PoseLoopThreadActionCart: {0} ***** STARTING THREAD ActionDualSpaceGlobalMinimize interactive.application.shared.tool_util: {0} RT: 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 AngleConstraint::p1_deriv: short bonds: 0 core.scoring.hbonds.hbonds_geom: {0} [ ERROR ] NAN occurred in H-bonding calculations! core.scoring.hbonds.hbonds_geom: {0} [ ERROR ] Dxyz NAN NAN NAN Hxyz -NAN(IND) -NAN(IND) -NAN(IND) BACKTRACE: 1: c10::ivalue::Future::waitAndThrow +48373716 bytes (no line) 2: c10::ivalue::Future::waitAndThrow +38082139 bytes (no line) 3: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line) 4: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line) 5: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line) 6: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line) 7: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line) 8: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line) 9: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line) 10: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line) 11: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line) 12: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line) 13: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line) 14: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line) 15: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line) 16: c10::ivalue::Future::waitAndThrow +725417 bytes (no line) 17: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line) 18: library_main +5087016 bytes (no line) 19: library_main +5102482 bytes (no line) 20: library_main +4188365 bytes (no line) 21: library_main +4188561 bytes (no line) 22: BaseThreadInitThunk +13 bytes (no line) 23: RtlUserThreadStart +33 bytes (no line)

UNHANDLED EXCEPTION
** Encountered Crash at Unknown File:0
Unknown Exception
1: RaiseException +61 bytes (no line)
2: xmlXIncludeSetFlags +525012 bytes (no line)
3: c10::ivalue::Future::waitAndThrow +38083864 bytes (no line)
4: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line)
5: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line)
6: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line)
7: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line)
8: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line)
9: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line)
10: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line)
11: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line)
12: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line)
13: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line)
14: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line)
15: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line)
16: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line)
17: c10::ivalue::Future::waitAndThrow +725417 bytes (no line)
18: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line)
19: library_main +5087016 bytes (no line)
20: library_main +5102482 bytes (no line)
21: library_main +4188365 bytes (no line)
22: library_main +4188561 bytes (no line)
23: BaseThreadInitThunk +13 bytes (no line)
24: RtlUserThreadStart +33 bytes (no line)

1: RaiseException +61 bytes (no line)
2: xmlXIncludeSetFlags +525012 bytes (no line)
3: c10::ivalue::Future::waitAndThrow +38083864 bytes (no line)
4: c10::ivalue::Future::waitAndThrow +38083972 bytes (no line)
5: c10::ivalue::Future::waitAndThrow +35469649 bytes (no line)
6: c10::ivalue::Future::waitAndThrow +40614674 bytes (no line)
7: c10::ivalue::Future::waitAndThrow +35286449 bytes (no line)
8: c10::ivalue::Future::waitAndThrow +35279494 bytes (no line)
9: c10::ivalue::Future::waitAndThrow +35257347 bytes (no line)
10: c10::ivalue::Future::waitAndThrow +31963306 bytes (no line)
11: c10::ivalue::Future::waitAndThrow +31960844 bytes (no line)
12: c10::ivalue::Future::waitAndThrow +32603651 bytes (no line)
13: c10::ivalue::Future::waitAndThrow +32613729 bytes (no line)
14: c10::ivalue::Future::waitAndThrow +31984991 bytes (no line)
15: c10::ivalue::Future::waitAndThrow +31983731 bytes (no line)
16: c10::ivalue::Future::waitAndThrow +1478445 bytes (no line)
17: c10::ivalue::Future::waitAndThrow +725417 bytes (no line)
18: c10::ivalue::Future::waitAndThrow +1474601 bytes (no line)
19: library_main +5087016 bytes (no line)
20: library_main +5102482 bytes (no line)
21: library_main +4188365 bytes (no line)
22: library_main +4188561 bytes (no line)
23: BaseThreadInitThunk +13 bytes (no line)
24: RtlUserThreadStart +33 bytes (no line)

[rmoretti]

Once you get the multiple "stub atoms nearly colinear" message in the log, that means your structure has the corrupted atom coordinates. Foldit might not immediately crash at that point, but the structure is corrupted enough that it's junk and will likely eventually lead to a crash. That corrupted atom state will persist across structure saving/loading. (So re-loading a saved solution with the corruption will still get you a corrupted structure.)

We're trying to track down when the atom corruption happens, but the fact that it's rare and only becomes a visible issue sometime later than when it initially happens makes that difficult. Any additional information on what sorts of actions cause the initial atom corruption (at this point the "stub atoms nearly colinear" message is the best proxy) in different situations would be helpful in tracking this down.

[rmoretti]

The new hotfix to devprev (20221101-121c245d5d) should contain some extra debugging code which should help narrow down the issue.

To enable the extra checking, add the line "extra_checks" : "1" to your options.txt file. This has the possibility to (slightly) slow down Foldit, but should allow us to capture exactly when the issue expresses itself. You should get a "Issue with atom positioning detected." popup when the issue appears, and a report will be sent to the Foldit server.

Knowing when the popup shows up (what is going on at the time and what sort of actions lead up to it) should help in debugging the issue. (Note that if you load a structure which already is known to have the issue, you'll also get the popup, but that's expected and of limited help in tracking down the core issue.)

[Bletchley Park]

@rmoretti It happened again when I first loaded puzzle 2222. Here is the screenshot. I hope you received an automatic report.
Resetting the puzzle does NOT correct the problem while still in the same client though. I had to exit the client, start a new client and then reset the puzzle before the score went normal again.