Crash on 1671 (console output):
terminate called after throwing an instance of 'utility::excn::RangeError'
what():
File: /home/jflat06/foldit/develop/source/cmake_2/build_release/../../src/core/pack/dunbrack/SingleResidueDunbrackLibrary.hh:305
chi angle must be between -180 and 180: -nan
My Linux client crashes every time i try to close it.
When i click on cross in title bar it crashes without asking me to save.
When i click 'Save and Exit' in main menu it asks and crashes when i click on 'Yes'.
Crash on update (after restart).
Console output:
terminate called after throwing an instance of 'std::logic_error'
what(): basic_string::_M_construct null not valid
Log.txt contains only:
args passed:
Crash on 1737.
Console output:
terminate called after throwing an instance of 'utility::UtilityExitException'
what():
File: /home/jflat06/foldit/release/source/cmake_2/build_release/../../src/interactive/util/refcount/access_ptr.hh:218
[ ERROR ] UtilityExitException
ERROR: ptr_.valid()
also log.txt (started on other puzzle)
Crash on 1758
Console output:
** longjmp causes uninitialized stack frame **: ./Foldit terminated
Disulfide bridge puzzle crash still persist.
My system is Ubuntu 18.04.3 LTS
Disulfides are banded to each other.
Console output looks like this:
LLVM ERROR: out of memory
or (two equal strings):
LLVM ERROR: out of memory
LLVM ERROR: out of memory
here is strace log
Me too, crashes after several seconds Ubuntu 16 on latest update with recipes only (and systematically) on puzzle 1762.
args passed:
'/home/bruno/Bureau/Foldit/00000000Lien vers Foldit'
args used:
'/home/bruno/Bureau/Foldit/00000000Lien vers Foldit'
'-resources'
'cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources'
'-database'
'cmp-database-fb137240c5d3860cd3853cc25565f8fc/database'
'-interactive_game'
'novice'
'-boinc_url'
'https://fold.it'
'-interactive:interactive_residue_types'
'-ignore_unrecognized_res'
'-out:level'
'200'
'-out:no_color'
'-load_PDB_components'
'false'
We're loading in the hotkeys
loading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileloading hotkey fileWe loaded in the hotkeys
Can't open audio device.
starting the init thread!..
boinc base url: https://fold.it
checking updates…
binary
local: 'eec6ab12bbd43985d1600aa86c72ccdf'
remote: 'eec6ab12bbd43985d1600aa86c72ccdf'
database
local: 'fb137240c5d3860cd3853cc25565f8fc'
remote: 'fb137240c5d3860cd3853cc25565f8fc'
resources
local: '1e8bcb69156e40a1336e1f920fdaa0a0'
remote: '1e8bcb69156e40a1336e1f920fdaa0a0'
cleaning up old components:
binary eec6ab12bbd43985d1600aa86c72ccdf
resources 1e8bcb69156e40a1336e1f920fdaa0a0
resources 00000000000000000000000000000000
database fb137240c5d3860cd3853cc25565f8fc
binary 00000000000000000000000000000000
REPORTING CRASH: 447652
SoundTheme::load: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_00.ogg
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_01.ogg
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_02.ogg
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_03.ogg
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_04.ogg
loading: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/sounds/organic_01/rotamer_land_05.ogg
(@init_machine_log)intro_level_version_ is 0
SVM classifier successfully loaded
Feature list successfully loaded
Valid classifier feature list
REMOTE Local Address 0: 127.0.1.1
buildid: 20190827-32048a6a12-linux_x64
Duplicate hotkey action UNDO_UNDO (, Undo)
Duplicate hotkey action UNDO_REDO (, Redo)
Duplicate hotkey action UNDO_RESTORE_BEST (, Restore Very Best)
about to create view_options_button_
setting side chain mode to: 2 Show All (Slow)
Found remote enable option: 0
Playing: sounds/organic_01/splashscreen.ogg
Converting any old-style quicksaves and autosaves…
Sending SOPs:
Sending SOPs:
About to show the puzzle screen…
Trying to get the puzzle list…
Loading cache…
Parsing puzzle URL…
Parsing contests…
Parsing macros…
Saving the cache…
JM level version = 0
Using file: cmp-resources-1e8bcb69156e40a1336e1f920fdaa0a0/resources/levels/puzzles_linear_complex.intros
Parsing level completion…
Sending SOPs:
Initting the list…
Got the puzzles…
Sending SOPs:
Finished show_puzzle_screen…
Sending SOPs:
has key .owts
has key .opdb
has key .opuzzle_setup
has key .ofilters
starting score : 466.565
puzzle loaded
Autosave puzzles/0002008294/0000447652/default/autosave.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-best.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-recentbest.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-creditbest.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave3.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave10.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-best-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-recentbest-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave3-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave4-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave5-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave6-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave7-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave8-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave9-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave10-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave11-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave12-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave13-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave19-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave50-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave51-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave52-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave53-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave54-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave55-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave56-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave57-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave58-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave59-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave60-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave61-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave62-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave63-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave98-improver.ir_solution loaded.
Quicksave puzzles/0002008294/0000447652/default/quicksave99-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-best-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-recentbest-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-creditbest.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-best-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-recentbest-improver.ir_solution loaded.
Autosave puzzles/0002008294/0000447652/default/autosave-creditbest.ir_solution loaded.
building library…done.
clear density…
ScorePanel new session
GROUP CHAT CHANNEL: GoScience
SRVR_THRD getting notifications…
BOINC says connect to: irc.fold.it:6667
Using nick: Bruno_Kestemont
Initting IRC mappings…
Error: not connected to IRC when init happened.
Ended Initialization of GameApplication
Entering IRC::run
Sending SOPs:
Sending SOPs:
IRC::run error, code = 5, desc = Remote connection closed
Exiting IRC::run
Sending SOPs:
Sending SOPs:
Sending SOPs:
Time: 63.6921 - Tool on_action_complete called
Time: 63.7791 - Tool on_action_complete called
Time: 66.8529 - Tool on_action_complete called
Time: 66.8696 - Tool on_action_complete called
Sending SOPs:
*** STARTING THREAD ActionGlobalMinimize
RT: 1111111111111111111111111111111111111111111111111111111111111
*** ENDING THREAD ActionGlobalMinimize
Time: 71.552 - Tool on_action_complete called
Time: 71.5951 - Tool on_action_complete called
Time: 71.6125 - Tool on_action_complete called
Time: 71.668 - Tool on_action_complete called
***** STARTING THREAD ActionGlobalMinimizeBackbone
RT: 1111111111111111111111111111111111111111111111111111111111111
Sending SOPs:
*** ENDING THREAD ActionGlobalMinimizeBackbone
Time: 72.4589 - Tool on_action_complete called
*** STARTING THREAD ActionGlobalMinimize
RT: 1111111111111111111111111111111111111111111111111111111111111
Sending SOPs:
*** ENDING THREAD ActionGlobalMinimize
Time: 78.5725 - Tool on_action_complete called
Time: 78.5948 - Tool on_action_complete called
Time: 78.6143 - Tool on_action_complete called
Time: 78.6856 - Tool on_action_complete called
*** STARTING THREAD ActionGlobalMinimizeBackbone
RT: 1111111111111111111111111111111111111111111111111111111111111
*** ENDING THREAD ActionGlobalMinimizeBackbone
Time: 81.0002 - Tool on_action_complete called
*** STARTING THREAD ActionGlobalMinimize
RT: 1111111111111111111111111111111111111111111111111111111111111
Another crash on puzzle change 1769 -> 1772
Console output:
malloc_consolidate(): invalid chunk size
Last strings from log.txt:
downloading: http://fold.it/portal/files/puzzle_pdb/puzzle_post_1907.zip
has key .owts
has key .opdb
has key .opuzzle_setup
has key .ofilters
starting score : 996.524
puzzle loaded
Another crash on puzzle change 1770 -> 1773
Console output:
double free or corruption (fasttop)
Last strings from log.txt:
downloading: http://fold.it/portal/files/puzzle_pdb/puzzle_post_1910.zip
has key .ocmdline
has key .sym
has key .roscript
TASKOPERATIONS
SCOREFXNS
FILTERS
MOVERS
APPLY_TO_POSE
PROTOCOLS
has key .owts
has key .opdb
core.conformation.Conformation: [ WARNING ] missing heavyatom: OXT on residue ILE:CtermProteinFull 90
[WARNING] Making asymmetric foldtree for asymmetric pose when symmetry is active!
has key .opuzzle_setup
has key .ofilters
[WARNING] Making asymmetric foldtree for asymmetric pose when symmetry is active!
core.conformation.symmetry.SymmData: [ WARNING ] Setting weight of master jump ( jump-id=6 ) to 1.0 (was undefined)
core.conformation.symmetry.SymmData: [ WARNING ] Setting jump_group JGS: [master 6] 7:0 8:0
core.conformation.symmetry.SymmData: [ WARNING ] Setting weight of master jump ( jump-id=1 ) to 1.0 (was undefined)
core.conformation.symmetry.SymmData: [ WARNING ] Setting jump_group JGSS: [master 1] 2:0 3:0
core.conformation.symmetry.SymmData: [ WARNING ] Setting weight of master jump ( jump-id=6 ) to 1.0 (was undefined)
core.conformation.symmetry.SymmData: [ WARNING ] Setting jump_group JGS: [master 6] 7:0 8:0
core.conformation.symmetry.SymmData: [ WARNING ] Setting weight of master jump ( jump-id=1 ) to 1.0 (was undefined)
core.conformation.symmetry.SymmData: [ WARNING ] Setting jump_group JGSS: [master 1] 2:0 3:0
starting score : 43275
puzzle loaded