It might be nice if you developers could put a few of the new tools into the cookbook. Specifically:
–auto-mutate (all)
–insert/delete sidechain
–Behavior change
I myself think it would be a bit too complicated to add in a feature to mutate specific sidechains to specific ammino acids, so I won't suggest it. However, the features above would seem fairly straightforward to add.
I'd like tweak to be semi-automated. I can think of a few sequences that involve tweak I use that would be nice to run automatically.
I actually go into the Behavior tab and change the Clashing Importance setting often when I'm folding proteins; it's especially useful when trying to compact the protein (when combined with a shake). I would absolutely love to be able to automate that with a recipe versus shaking and repeatedly twiddling the Clashing Importance slider when I'm doing it over and over and over again.
There definitely should be commands that reflect new features in the game. Also, there should be a reset structure command, in because recipes that involve changing the structure should be asle to change the structure back once finished.
GIU scripts are outdated. We can script in LUA. Closing.