Proposal: Puzzle points based upon the scientific value of puzzle

[spmm]

It may be that a script changed the segments to loops, this is often done by end game scripts. People often loose their SS at this point.

Rebuilds will often get better results if the SS is changed to loops, just have to change them back again later.

Mutate is used in design puzzles and the approach and goals are different to the standard proteins.

[AsDawnBreaks]

And often when changes to loops, I'd imagine, the protein is already pretty stable so there shouldn't be much of an impact on that front. Could be wrong though.