Placeholder image of a protein
Icon representing a puzzle

1025: Revisiting Electron Density Puzzle 724

Closed since about 11 years ago

Intermediate Overall Prediction Electron Density

Summary

Created
December 13, 2014
Expires
Max points
100
Description

We're revisiting this old electron density puzzle to test some recent changes to Foldit! In this puzzle, there are bits of density which don't belong to the copy of the protein that you're working on. You'll have to decide which bits of density to match with, and which bits to ignore. Try to fit the protein into the density to get the best score! Secondary structure predictions are posted in the puzzle comments along with info about available tools in the game.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 11,558
  2. Avatar for Void Crushers 2. Void Crushers 82 pts. 11,300
  3. Avatar for Beta Folders 3. Beta Folders 66 pts. 11,119
  4. Avatar for Gargleblasters 4. Gargleblasters 53 pts. 11,068
  5. Avatar for Go Science 5. Go Science 42 pts. 10,944
  6. Avatar for SETI.Germany 6. SETI.Germany 33 pts. 10,902
  7. Avatar for L'Alliance Francophone 7. L'Alliance Francophone 26 pts. 10,789
  8. Avatar for Contenders 8. Contenders 20 pts. 10,716
  9. Avatar for Deleted group 9. Deleted group pts. 10,384
  10. Avatar for Italiani Al Lavoro 10. Italiani Al Lavoro 11 pts. 10,228
  1. Avatar for bcd 71. bcd Lv 1 15 pts. 9,705
  2. Avatar for ecali 72. ecali Lv 1 15 pts. 9,687
  3. Avatar for Bushman 73. Bushman Lv 1 14 pts. 9,676
  4. Avatar for frezae 74. frezae Lv 1 14 pts. 9,609
  5. Avatar for jobo0502 75. jobo0502 Lv 1 14 pts. 9,591
  6. Avatar for pvc78 76. pvc78 Lv 1 13 pts. 9,586
  7. Avatar for malthreSC 77. malthreSC Lv 1 13 pts. 9,564
  8. Avatar for Already taken 78. Already taken Lv 1 12 pts. 9,540
  9. Avatar for tzabaoth 79. tzabaoth Lv 1 12 pts. 9,531
  10. Avatar for g_b 80. g_b Lv 1 11 pts. 9,527

Comments

bkoep Staff Lv 1

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

The above predictions are already on the starting model (based on the horizontal lines in the above figure).
______________

Cutaway view hint:
If you hover your mouse over a segment and type shift-Q, the game will hide parts of the protein and cloud that are not in the same plane as that segment - it cuts down on how much cloud you see at one time and makes it easier to focus. Q returns to normal view.

Bruno Kestemont Lv 1

Who knows what is the equivalent of shift-Q and Q on a Mac (for me under azerty keyboard, Q changes a view, shift-Q does something like undo) ?