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2424: Electron Density Reconstruction 80

Closed since about 2 years ago

Novice Overall Prediction Electron Density

Summary

Created
February 22, 2024
Expires
Max points
100
Description

The structure of this protein has already been solved and published, but close inspection suggests that there are some problems with the published solution. We'd like to see if Foldit players can use the same electron density data to reconstruct a better model. There's two copies of two chains each in this structure, two of which are quite short.

Sequence
A, C: MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKAF. B,D: FRSKGEELFT

Top groups

  1. Avatar for L'Alliance Francophone
    1. L'Alliance Francophone
    100 pts. 36,040
  2. Avatar for Anthropic Dreams 2. Anthropic Dreams 73 pts. 36,010
  3. Avatar for Go Science 3. Go Science 52 pts. 36,010
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  6. Avatar for Marvin's bunch 6. Marvin's bunch 16 pts. 35,726
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  8. Avatar for VeFold 8. VeFold 6 pts. 35,558
  9. Avatar for Russian team 9. Russian team 4 pts. 35,472
  10. Avatar for Gargleblasters 10. Gargleblasters 2 pts. 35,251
  1. Avatar for LociOiling
    1. LociOiling Lv 1
    100 pts. 36,007
  2. Avatar for Galaxie 2. Galaxie Lv 1 24 pts. 36,007
  3. Avatar for alcor29 3. alcor29 Lv 1 4 pts. 35,999
  4. Avatar for jamiexq 4. jamiexq Lv 1 1 pt. 35,910
  5. Avatar for Bruno Kestemont 5. Bruno Kestemont Lv 1 1 pt. 35,830

Comments

Serca Lv 1

Secondary structure prediction (JPred) is pretty close to what we see here.
LLLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLL