200: Mini-CASP 4-Freestyle

Closed since over 16 years ago

Summary

• Created: September 22, 2009
• Expires: September 29, 2009 at 23:00 UTC
• Max points: 100

Description

Here is the next Mini-CASP target whose solved structure will be released soon. Again we are giving you an extended chain to see what you come up with. This might be very difficult, since this blind prediction has 138 residues, so we will release a Rosetta prediction for this target later this week. Until then, good luck freestyle folding! As suggested in the feedback the secondary structure prediction is posted in the puzzle comments.

Top groups

• 1. Richard Dawkins Foundation 100 pts. 10,661
• 2. Deleted group pts. 10,454
• 3. Void Crushers 54 pts. 10,443
• 4. Russian team 38 pts. 10,329
• 5. Contenders 27 pts. 10,226
• 6. Deleted group pts. 10,172
• 7. ExPitneyFolders 12 pts. 9,707
• 8. L'Alliance Francophone 8 pts. 9,661
• 9. SETI.Germany 5 pts. 9,660
• 10. Deleted group pts. 9,513

Top soloists

• 61. bent_halo 5 pts. 9,016
• 62. mgrahamg 5 pts. 8,994
• 63. Sergyg 4 pts. 8,961
• 64. houngi 4 pts. 8,939
• 65. Deleted player pts. 8,935
• 66. Wooz 4 pts. 8,919
• 67. firejuggler 3 pts. 8,898
• 68. Seneca 3 pts. 8,867
• 69. auntdeen 3 pts. 8,852
• 70. turbolag 3 pts. 8,817

Comments

[beta_helix]

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Cysteine at residue 110 is highly predicted to be part of a helix. However, the Leucine at residue 64 is predicted to have an equal probability of being anything.