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206: Mini-CASP 6-Freestyle

Closed since over 16 years ago

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Summary

Created
October 07, 2009
Expires
Max points
100
Description

Here is the next Mini-CASP target whose solved structure will be released soon. Again we are giving you an extended chain to see what you come up with. This might be very difficult, since this blind prediction has 121 residues, so we will give you Rosetta@home predictions for this target next week. Until then, good luck freestyle folding! We will post the secondary structure predictions for this puzzle in the puzzle comments.

Top groups

  1. Avatar for the pyromaniatic amoebas 21. the pyromaniatic amoebas 1 pt. 8,564
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  3. Avatar for The NEW, Door Group 23. The NEW, Door Group 1 pt. 8,380
  4. Avatar for BOINC@Poland 24. BOINC@Poland 1 pt. 8,100
  5. Avatar for Team Commonwealth 25. Team Commonwealth 1 pt. 7,551
  6. Avatar for NETD 26. NETD 1 pt. 6,364
  7. Avatar for Sundodgers 27. Sundodgers 1 pt. 0
  8. Avatar for Furries 28. Furries 1 pt. 0
  9. Avatar for Erhvervspraktik 29. Erhvervspraktik 1 pt. 0
  1. Avatar for beta_helix 181. beta_helix Lv 1 1 pt. 0
  2. Avatar for jingjingshou 182. jingjingshou Lv 1 1 pt. 0
  3. Avatar for zzzkev 183. zzzkev Lv 1 1 pt. 0
  4. Avatar for addis 184. addis Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 101 is highly predicted to be part of a sheet. However, the Alanine at residue 61 is predicted to have an equal probability of being anything.