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206: Mini-CASP 6-Freestyle

Closed since over 16 years ago

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Summary

Created
October 07, 2009
Expires
Max points
100
Description

Here is the next Mini-CASP target whose solved structure will be released soon. Again we are giving you an extended chain to see what you come up with. This might be very difficult, since this blind prediction has 121 residues, so we will give you Rosetta@home predictions for this target next week. Until then, good luck freestyle folding! We will post the secondary structure predictions for this puzzle in the puzzle comments.

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  1. Avatar for rachel12 171. rachel12 Lv 1 1 pt. 0
  2. Avatar for frink643 172. frink643 Lv 1 1 pt. 0
  3. Avatar for beta_helix 173. beta_helix Lv 1 1 pt. 0
  4. Avatar for jingjingshou 174. jingjingshou Lv 1 1 pt. 0
  5. Avatar for zzzkev 175. zzzkev Lv 1 1 pt. 0
  6. Avatar for addis 176. addis Lv 1 1 pt. 0
  7. Avatar for secpter23 177. secpter23 Lv 1 1 pt. 0
  8. Avatar for beenen34 178. beenen34 Lv 1 1 pt. 0
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  10. Avatar for mettelie 180. mettelie Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 101 is highly predicted to be part of a sheet. However, the Alanine at residue 61 is predicted to have an equal probability of being anything.