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386: De-novo Freestyle

Closed since over 15 years ago

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Summary

Created
December 02, 2010
Expires
Max points
100
Description

It's been a while since we gave you a freestyle puzzle to work on, but this unsolved protein does not have any templates. We will post the secondary structure predictions in the puzzle comments when they come back from the SAM server.

Top groups

  1. Avatar for Phe-Thr-Trp 21. Phe-Thr-Trp 1 pt. 9,991
  2. Avatar for Deleted group 22. Deleted group pts. 9,845
  3. Avatar for BOINC@Poland 23. BOINC@Poland 1 pt. 9,581
  4. Avatar for Crunching Family 24. Crunching Family 1 pt. 9,253
  5. Avatar for turkish voluntered 25. turkish voluntered 1 pt. 9,253
  6. Avatar for Team Commonwealth 26. Team Commonwealth 1 pt. 9,247
  7. Avatar for Czech National Team 27. Czech National Team 1 pt. 9,208
  8. Avatar for Team South Africa 28. Team South Africa 1 pt. 8,597
  9. Avatar for DSN @ Home 29. DSN @ Home 1 pt. 8,177
  10. Avatar for Friday Lab 30. Friday Lab 1 pt. 7,812
  1. Avatar for koby95 271. koby95 Lv 1 1 pt. 0
  2. Avatar for LoLoLoLoLoLoLo 272. LoLoLoLoLoLoLo Lv 1 1 pt. 0
  3. Avatar for Ungoliant 273. Ungoliant Lv 1 1 pt. 0
  4. Avatar for B_2 274. B_2 Lv 1 1 pt. 0
  5. Avatar for Tesla_94 275. Tesla_94 Lv 1 1 pt. 0
  6. Avatar for Samasaru 276. Samasaru Lv 1 1 pt. 0
  7. Avatar for MHannigan 277. MHannigan Lv 1 1 pt. 0
  8. Avatar for symaski62 278. symaski62 Lv 1 1 pt. 0
  9. Avatar for leobold 279. leobold Lv 1 1 pt. 0
  10. Avatar for spellkevin 280. spellkevin Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 21 is highly predicted to be part of a helix. However, the Leucine at residue 29 is predicted to have an equal probability of being anything.