Placeholder image of a protein
Icon representing a puzzle

386: De-novo Freestyle

Closed since over 15 years ago

Advanced

Summary

Created
December 02, 2010
Expires
Max points
100
Description

It's been a while since we gave you a freestyle puzzle to work on, but this unsolved protein does not have any templates. We will post the secondary structure predictions in the puzzle comments when they come back from the SAM server.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 11,717
  2. Avatar for Contenders 2. Contenders 85 pts. 11,664
  3. Avatar for Void Crushers 3. Void Crushers 72 pts. 11,657
  4. Avatar for Go Science 4. Go Science 61 pts. 11,074
  5. Avatar for Deleted group 5. Deleted group pts. 10,933
  6. Avatar for Natural Abilities 6. Natural Abilities 42 pts. 10,920
  7. Avatar for L'Alliance Francophone 7. L'Alliance Francophone 35 pts. 10,745
  8. Avatar for Mojo Risin' 8. Mojo Risin' 28 pts. 10,732
  9. Avatar for SETI.Germany 9. SETI.Germany 23 pts. 10,727
  10. Avatar for Deleted group 10. Deleted group pts. 10,689
  1. Avatar for lynnj15 141. lynnj15 Lv 1 4 pts. 9,411
  2. Avatar for CoachB 142. CoachB Lv 1 4 pts. 9,407
  3. Avatar for rpluhar 143. rpluhar Lv 1 4 pts. 9,404
  4. Avatar for benjyl 144. benjyl Lv 1 4 pts. 9,336
  5. Avatar for mirjamvandelft 145. mirjamvandelft Lv 1 3 pts. 9,290
  6. Avatar for Deleted player 146. Deleted player pts. 9,288
  7. Avatar for Seneca 147. Seneca Lv 1 3 pts. 9,253
  8. Avatar for minick 148. minick Lv 1 3 pts. 9,253
  9. Avatar for Canada_David 149. Canada_David Lv 1 3 pts. 9,247
  10. Avatar for Ladenhorcher 150. Ladenhorcher Lv 1 3 pts. 9,226

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 21 is highly predicted to be part of a helix. However, the Leucine at residue 29 is predicted to have an equal probability of being anything.