Placeholder image of a protein
Icon representing a puzzle

386: De-novo Freestyle

Closed since over 15 years ago

Advanced

Summary

Created
December 02, 2010
Expires
Max points
100
Description

It's been a while since we gave you a freestyle puzzle to work on, but this unsolved protein does not have any templates. We will post the secondary structure predictions in the puzzle comments when they come back from the SAM server.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 11,717
  2. Avatar for Contenders 2. Contenders 85 pts. 11,664
  3. Avatar for Void Crushers 3. Void Crushers 72 pts. 11,657
  4. Avatar for Go Science 4. Go Science 61 pts. 11,074
  5. Avatar for Deleted group 5. Deleted group pts. 10,933
  6. Avatar for Natural Abilities 6. Natural Abilities 42 pts. 10,920
  7. Avatar for L'Alliance Francophone 7. L'Alliance Francophone 35 pts. 10,745
  8. Avatar for Mojo Risin' 8. Mojo Risin' 28 pts. 10,732
  9. Avatar for SETI.Germany 9. SETI.Germany 23 pts. 10,727
  10. Avatar for Deleted group 10. Deleted group pts. 10,689
  1. Avatar for Rav3n_pl 31. Rav3n_pl Lv 1 58 pts. 10,755
  2. Avatar for FoxyLady 32. FoxyLady Lv 1 57 pts. 10,746
  3. Avatar for Ch Garnier 33. Ch Garnier Lv 1 56 pts. 10,745
  4. Avatar for Tlaloc 34. Tlaloc Lv 1 55 pts. 10,732
  5. Avatar for Sergey2002 35. Sergey2002 Lv 1 53 pts. 10,725
  6. Avatar for LagMasterSam 36. LagMasterSam Lv 1 52 pts. 10,715
  7. Avatar for tallguy-13088 37. tallguy-13088 Lv 1 51 pts. 10,710
  8. Avatar for Jedrik 38. Jedrik Lv 1 50 pts. 10,703
  9. Avatar for aendgraend 39. aendgraend Lv 1 49 pts. 10,701
  10. Avatar for scottyler89 40. scottyler89 Lv 1 48 pts. 10,689

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 21 is highly predicted to be part of a helix. However, the Leucine at residue 29 is predicted to have an equal probability of being anything.