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388: De-novo Freestyle 2

Closed since over 15 years ago

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Summary

Created
December 07, 2010
Expires
Max points
100
Description

Another Freestyle Puzzle. Please try using the secondary structure predictions in the puzzle comments.

Top groups

  1. Avatar for Team Commonwealth 21. Team Commonwealth 1 pt. 8,373
  2. Avatar for Penny-Arcade 22. Penny-Arcade 1 pt. 8,331
  3. Avatar for ROMANIA Team 23. ROMANIA Team 1 pt. 7,725
  4. Avatar for Cannabis Crew 24. Cannabis Crew 1 pt. 4,644
  5. Avatar for Super Happy Fun Time 25. Super Happy Fun Time 1 pt. 0
  1. Avatar for SKSbell 61. SKSbell Lv 1 26 pts. 11,045
  2. Avatar for Steve001 62. Steve001 Lv 1 26 pts. 11,029
  3. Avatar for kinkouin 63. kinkouin Lv 1 25 pts. 11,026
  4. Avatar for Kyrill 64. Kyrill Lv 1 24 pts. 11,005
  5. Avatar for NinjaGreg 65. NinjaGreg Lv 1 24 pts. 10,956
  6. Avatar for philcalhoun 66. philcalhoun Lv 1 23 pts. 10,955
  7. Avatar for anne romaine 67. anne romaine Lv 1 22 pts. 10,929
  8. Avatar for John McLeod 68. John McLeod Lv 1 22 pts. 10,914
  9. Avatar for Bluefire526 69. Bluefire526 Lv 1 21 pts. 10,887
  10. Avatar for beta68 70. beta68 Lv 1 21 pts. 10,880

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 68 is highly predicted to be part of a helix. However, the Glycine at residue 11 is highly predicted to be part of a loop.