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388: De-novo Freestyle 2

Closed since about 15 years ago

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Summary

Created
December 07, 2010
Expires
Max points
100
Description

Another Freestyle Puzzle. Please try using the secondary structure predictions in the puzzle comments.

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  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 12,703
  2. Avatar for Contenders 2. Contenders 81 pts. 12,422
  3. Avatar for Russian team 3. Russian team 65 pts. 12,310
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  6. Avatar for L'Alliance Francophone 6. L'Alliance Francophone 32 pts. 11,937
  7. Avatar for Richard Dawkins Foundation 7. Richard Dawkins Foundation 24 pts. 11,901
  8. Avatar for Deleted group 8. Deleted group pts. 11,888
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  10. Avatar for Go Science 10. Go Science 10 pts. 11,775
  1. Avatar for mberna00 131. mberna00 Lv 1 3 pts. 9,643
  2. Avatar for smith92clone 132. smith92clone Lv 1 3 pts. 9,613
  3. Avatar for Bithalbierer 133. Bithalbierer Lv 1 3 pts. 9,608
  4. Avatar for sielenk 134. sielenk Lv 1 3 pts. 9,551
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  7. Avatar for foldzapr 137. foldzapr Lv 1 3 pts. 9,382
  8. Avatar for leprechaun 138. leprechaun Lv 1 2 pts. 9,375
  9. Avatar for JPP 139. JPP Lv 1 2 pts. 9,359
  10. Avatar for Deleted player 140. Deleted player pts. 9,346

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 68 is highly predicted to be part of a helix. However, the Glycine at residue 11 is highly predicted to be part of a loop.