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388: De-novo Freestyle 2

Closed since about 15 years ago

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Summary

Created
December 07, 2010
Expires
Max points
100
Description

Another Freestyle Puzzle. Please try using the secondary structure predictions in the puzzle comments.

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  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 12,703
  2. Avatar for Contenders 2. Contenders 81 pts. 12,422
  3. Avatar for Russian team 3. Russian team 65 pts. 12,310
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  6. Avatar for L'Alliance Francophone 6. L'Alliance Francophone 32 pts. 11,937
  7. Avatar for Richard Dawkins Foundation 7. Richard Dawkins Foundation 24 pts. 11,901
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  10. Avatar for Go Science 10. Go Science 10 pts. 11,775
  1. Avatar for F1ghteR 211. F1ghteR Lv 1 1 pt. 7,501
  2. Avatar for tirillifluet 212. tirillifluet Lv 1 1 pt. 7,499
  3. Avatar for Maumau 213. Maumau Lv 1 1 pt. 7,495
  4. Avatar for spithre 214. spithre Lv 1 1 pt. 7,365
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  6. Avatar for ilico 216. ilico Lv 1 1 pt. 6,645
  7. Avatar for Fods12 217. Fods12 Lv 1 1 pt. 6,378
  8. Avatar for yam10002 218. yam10002 Lv 1 1 pt. 6,274
  9. Avatar for wilsonctr 219. wilsonctr Lv 1 1 pt. 6,031
  10. Avatar for dero-dero 220. dero-dero Lv 1 1 pt. 5,834

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 68 is highly predicted to be part of a helix. However, the Glycine at residue 11 is highly predicted to be part of a loop.