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388: De-novo Freestyle 2

Closed since about 15 years ago

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Summary

Created
December 07, 2010
Expires
Max points
100
Description

Another Freestyle Puzzle. Please try using the secondary structure predictions in the puzzle comments.

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  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 12,703
  2. Avatar for Contenders 2. Contenders 81 pts. 12,422
  3. Avatar for Russian team 3. Russian team 65 pts. 12,310
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  10. Avatar for Go Science 10. Go Science 10 pts. 11,775
  1. Avatar for Ignacio 31. Ignacio Lv 1 54 pts. 11,775
  2. Avatar for mat747 32. mat747 Lv 1 52 pts. 11,764
  3. Avatar for SabineA 33. SabineA Lv 1 51 pts. 11,762
  4. Avatar for Bletchley Park 34. Bletchley Park Lv 1 50 pts. 11,758
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  8. Avatar for xedr 38. xedr Lv 1 46 pts. 11,709
  9. Avatar for fishercat 39. fishercat Lv 1 45 pts. 11,706
  10. Avatar for anthunk 40. anthunk Lv 1 44 pts. 11,682

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 68 is highly predicted to be part of a helix. However, the Glycine at residue 11 is highly predicted to be part of a loop.