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398: De-novo Freestyle 3

Closed since about 15 years ago

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Summary

Created
February 06, 2011
Expires
Max points
100
Description

This currently unsolved protein does not have any templates that we can use, so we are giving it to you as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments.

Top groups

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  8. Avatar for Team Commonwealth 18. Team Commonwealth 2 pts. 9,908
  9. Avatar for Crunching Family 19. Crunching Family 1 pt. 9,773
  10. Avatar for BOINC@Poland 20. BOINC@Poland 1 pt. 9,603
  1. Avatar for jobo0502 31. jobo0502 Lv 1 59 pts. 10,896
  2. Avatar for auntdeen 32. auntdeen Lv 1 58 pts. 10,886
  3. Avatar for johnmitch 33. johnmitch Lv 1 57 pts. 10,875
  4. Avatar for Deleted player 34. Deleted player 56 pts. 10,866
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  6. Avatar for Deleted player 36. Deleted player pts. 10,835
  7. Avatar for Jim Fraser 37. Jim Fraser Lv 1 52 pts. 10,808
  8. Avatar for Deleted player 38. Deleted player pts. 10,806
  9. Avatar for Tony Origami 39. Tony Origami Lv 1 50 pts. 10,791
  10. Avatar for Steve001 40. Steve001 Lv 1 49 pts. 10,786

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 26 is highly predicted to be part of a helix. However, the Leucine at residue 34 is predicted to have an equal probability of being anything.