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404: De-novo Freestyle 4

Closed since about 15 years ago

Advanced Overall Prediction

Summary

Created
March 09, 2011
Expires
Max points
100
Description

This currently unsolved protein does not have any templates that we can use, so we are giving it to you as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  4. Avatar for L'Alliance Francophone 14. L'Alliance Francophone 3 pts. 9,828
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  7. Avatar for TT-group 17. TT-group 1 pt. 9,609
  8. Avatar for Team Commonwealth 18. Team Commonwealth 1 pt. 9,522
  9. Avatar for Deleted group 19. Deleted group pts. 9,439
  10. Avatar for xkcd 20. xkcd 1 pt. 9,218
  1. Avatar for lazystar 31. lazystar Lv 1 55 pts. 9,914
  2. Avatar for Deleted player 32. Deleted player pts. 9,909
  3. Avatar for tallguy-13088 33. tallguy-13088 Lv 1 53 pts. 9,901
  4. Avatar for rsosborne 34. rsosborne Lv 1 52 pts. 9,893
  5. Avatar for fishercat 35. fishercat Lv 1 51 pts. 9,892
  6. Avatar for Mitchincredible 36. Mitchincredible Lv 1 49 pts. 9,891
  7. Avatar for Bletchley Park 37. Bletchley Park Lv 1 48 pts. 9,890
  8. Avatar for Kit Cosby 38. Kit Cosby Lv 1 47 pts. 9,881
  9. Avatar for itskimo 39. itskimo Lv 1 46 pts. 9,880
  10. Avatar for Dj-P 40. Dj-P Lv 1 45 pts. 9,879

Comments

beta_helix Staff Lv 1

As requested in the feedback, http://fold.it/portal/node/989298, these secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Isoleucine at residue 29 is highly predicted to be part of a helix. However, the Leucine at residue 97 is predicted to have an equal probability of being anything.