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Beginner Puzzle: T-cell Lymphoma Invasion Protein

Closed since almost 15 years ago

Intermediate

Summary

Created
March 20, 2011
Expires
Max points
100
Description

This is a Beginner puzzle for new players that have recently completed the Intro Puzzles. The starting model is very far from the correct native structure, can you use the Foldit tools you just learned to fix the model and match the guide?

Top groups

  1. Avatar for xkcd 11. xkcd 17 pts. 10,009
  2. Avatar for L'Alliance Francophone 12. L'Alliance Francophone 14 pts. 9,993
  3. Avatar for Deleted group 13. Deleted group pts. 9,966
  4. Avatar for Slovak National Team 14. Slovak National Team 9 pts. 9,935
  5. Avatar for SETI.Germany 15. SETI.Germany 7 pts. 9,912
  6. Avatar for Deleted group 16. Deleted group pts. 9,836
  7. Avatar for Mojo Risin' 17. Mojo Risin' 4 pts. 9,786
  8. Avatar for Penny-Arcade 18. Penny-Arcade 3 pts. 9,784
  9. Avatar for hhv9 19. hhv9 2 pts. 9,756
  10. Avatar for Nerdfighters 20. Nerdfighters 2 pts. 9,713
  1. Avatar for RenatasK 621. RenatasK Lv 1 1 pt. 8,845
  2. Avatar for wenskye 622. wenskye Lv 1 1 pt. 8,845
  3. Avatar for BuskyDubbs 623. BuskyDubbs Lv 1 1 pt. 8,845
  4. Avatar for mark_d0 624. mark_d0 Lv 1 1 pt. 8,845
  5. Avatar for r1a 625. r1a Lv 1 1 pt. 8,845
  6. Avatar for ilikecake84 626. ilikecake84 Lv 1 1 pt. 8,845
  7. Avatar for mitorn 627. mitorn Lv 1 1 pt. 8,845
  8. Avatar for FreakySmiley 628. FreakySmiley Lv 1 1 pt. 8,845
  9. Avatar for autarch 629. autarch Lv 1 1 pt. 8,845
  10. Avatar for T.W 630. T.W Lv 1 1 pt. 8,845

Comments

beta_helix Staff Lv 1

There is indeed a chain break between Lysine 11 and Threonine 12, six residues are missing in the native structure (PDB code: 3KZD).

We could have just ignored the terminal strand (and trimmed the first 11 residues) but it seems important to the stability of the protein.

We could also just add the missing residues back in and let you guess where they should go, but since this is a beginner puzzle we didn't want to confuse new Foldit players (since it wouldn't match the guide).