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410: De-novo Freestyle 5

Closed since almost 15 years ago

Advanced Overall Prediction

Summary

Created
April 05, 2011
Expires
Max points
100
Description

We are giving it to you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well. Since this protein chain is quite long, we are giving you 2 extra days to work on it.

Top groups

  1. Avatar for foldeRNA
    1. foldeRNA
    100 pts. 12,739
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  4. Avatar for Go Science 4. Go Science 56 pts. 12,570
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  6. Avatar for Anthropic Dreams 6. Anthropic Dreams 36 pts. 12,541
  7. Avatar for Contenders 7. Contenders 29 pts. 12,531
  8. Avatar for Deleted group 8. Deleted group pts. 12,479
  9. Avatar for SETI.Germany 9. SETI.Germany 18 pts. 12,075
  10. Avatar for Slovak National Team 10. Slovak National Team 14 pts. 12,062
  1. Avatar for ferzle 131. ferzle Lv 1 6 pts. 10,801
  2. Avatar for monkry 132. monkry Lv 1 6 pts. 10,740
  3. Avatar for Arne Heessels 133. Arne Heessels Lv 1 6 pts. 10,731
  4. Avatar for fairstar 134. fairstar Lv 1 5 pts. 10,682
  5. Avatar for Cerzax 135. Cerzax Lv 1 5 pts. 10,631
  6. Avatar for Daurer 136. Daurer Lv 1 5 pts. 10,614
  7. Avatar for Deleted player 137. Deleted player 5 pts. 10,609
  8. Avatar for NR22 138. NR22 Lv 1 5 pts. 10,591
  9. Avatar for tyler0911 139. tyler0911 Lv 1 5 pts. 10,548
  10. Avatar for Zephid 140. Zephid Lv 1 5 pts. 10,541

Comments

beta_helix Staff Lv 1

As requested in the feedback, http://fold.it/portal/node/989298 these secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Isoleucine at residue 23 is highly predicted to be part of a helix. However, the Threonine at residue 102 is predicted to have an equal probability of being anything.

CupcakeLulu Lv 1

Kinda hard to download I wish it were already loaded onto the site but it's a fun and educational game. I'd rate it four point five stars out of five stars.