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430: Easy Mini Freestyle Puzzle 1b

Closed since over 14 years ago

Beginner Overall Prediction

Summary

Created
June 14, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved short protein as an extended chain one last time. This time we are providing you with secondary structure predictions (available in the puzzle comments) that are pre-loaded in the puzzle. This puzzle will be worth 75 global points.

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Comments

beta_helix Staff Lv 1

This time we are providing you with secondary structure predictions (below) but you are unable to load previous solutions because we want to see how different your trajectories are when given secondary structure predictions.

As requested in the feedback, http://fold.it/portal/node/989298 these secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 28 is highly predicted to be part of a helix. However, the Serine at residue 39 is equally predicted to be anything.