Placeholder image of a protein
Icon representing a puzzle

434: De-novo Freestyle 9

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
June 27, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Purdue BoilerFolders 11. Purdue BoilerFolders 14 pts. 10,261
  2. Avatar for Natural Abilities 12. Natural Abilities 11 pts. 10,163
  3. Avatar for hhv9 13. hhv9 8 pts. 9,904
  4. Avatar for University of Washington 14. University of Washington 6 pts. 9,787
  5. Avatar for name_in_progress 15. name_in_progress 5 pts. 9,756
  6. Avatar for Eὕρηκα! Heureka! 16. Eὕρηκα! Heureka! 4 pts. 9,681
  7. Avatar for Extraterrestrials 17. Extraterrestrials 3 pts. 9,667
  8. Avatar for TT-group 18. TT-group 2 pts. 9,625
  9. Avatar for Mojo Risin' 19. Mojo Risin' 2 pts. 9,621
  10. Avatar for Crunching Family 20. Crunching Family 1 pt. 9,214
  1. Avatar for wld333
    1. wld333 Lv 1
    100 pts. 10,960
  2. Avatar for marie_s 2. marie_s Lv 1 99 pts. 10,879
  3. Avatar for spmm 3. spmm Lv 1 97 pts. 10,860
  4. Avatar for wudoo 4. wudoo Lv 1 95 pts. 10,849
  5. Avatar for Mark- 5. Mark- Lv 1 93 pts. 10,820
  6. Avatar for Deleted player 6. Deleted player pts. 10,808
  7. Avatar for scottyler89 7. scottyler89 Lv 1 89 pts. 10,785
  8. Avatar for deus911 8. deus911 Lv 1 87 pts. 10,732
  9. Avatar for steveB 9. steveB Lv 1 85 pts. 10,707
  10. Avatar for CharlieFortsConscience 10. CharlieFortsConscience Lv 1 84 pts. 10,698

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 18 is highly predicted to be part of a sheet. However, the Leucines at residue 122-123 are highly predicted to be in a helix.