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434: De-novo Freestyle 9

Closed since almost 15 years ago

Advanced Overall Prediction

Summary

Created
June 27, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  2. Avatar for Argentina 22. Argentina 1 pt. 9,167
  3. Avatar for Mmm Helix Fries. 23. Mmm Helix Fries. 1 pt. 9,103
  4. Avatar for Deleted group 24. Deleted group pts. 9,081
  5. Avatar for R12 25. R12 1 pt. 8,850
  6. Avatar for Minions of TWIS 26. Minions of TWIS 1 pt. 8,737
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  8. Avatar for Deleted group 28. Deleted group pts. 8,263
  9. Avatar for Team China 29. Team China 1 pt. 7,356
  10. Avatar for UCD2010 30. UCD2010 1 pt. 7,356
  1. Avatar for Skoal Face 221. Skoal Face Lv 1 1 pt. 7,355
  2. Avatar for Snoink 222. Snoink Lv 1 1 pt. 7,354
  3. Avatar for Yihmin 223. Yihmin Lv 1 1 pt. 7,354
  4. Avatar for amarant42 224. amarant42 Lv 1 1 pt. 7,354
  5. Avatar for lynnj15 225. lynnj15 Lv 1 1 pt. 7,352
  6. Avatar for Angmar 226. Angmar Lv 1 1 pt. 7,352
  7. Avatar for Leper Messiah 227. Leper Messiah Lv 1 1 pt. 7,286
  8. Avatar for warpigs330 228. warpigs330 Lv 1 1 pt. 7,247
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  10. Avatar for michelw 230. michelw Lv 1 1 pt. 7,159

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 18 is highly predicted to be part of a sheet. However, the Leucines at residue 122-123 are highly predicted to be in a helix.