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434: De-novo Freestyle 9

Closed since almost 15 years ago

Advanced Overall Prediction

Summary

Created
June 27, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  2. Avatar for Ysabell 152. Ysabell Lv 1 1 pt. 9,076
  3. Avatar for trinkulo 153. trinkulo Lv 1 1 pt. 9,068
  4. Avatar for Foss 154. Foss Lv 1 1 pt. 9,067
  5. Avatar for pruneau_44 155. pruneau_44 Lv 1 1 pt. 9,003
  6. Avatar for suttonwilliamd 156. suttonwilliamd Lv 1 1 pt. 8,995
  7. Avatar for Irmalover 157. Irmalover Lv 1 1 pt. 8,942
  8. Avatar for FRZ 158. FRZ Lv 1 1 pt. 8,928
  9. Avatar for quetzalcoatl 159. quetzalcoatl Lv 1 1 pt. 8,850
  10. Avatar for Karsten69 160. Karsten69 Lv 1 1 pt. 8,842

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 18 is highly predicted to be part of a sheet. However, the Leucines at residue 122-123 are highly predicted to be in a helix.