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434: De-novo Freestyle 9

Closed since almost 15 years ago

Advanced Overall Prediction

Summary

Created
June 27, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Cannabis Crew 31. Cannabis Crew 1 pt. 1,373
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  2. Avatar for lazystar 232. lazystar Lv 1 1 pt. 6,928
  3. Avatar for poiuytrewq 233. poiuytrewq Lv 1 1 pt. 4,436
  4. Avatar for Lord_c_nu 234. Lord_c_nu Lv 1 1 pt. 1,373
  5. Avatar for Deleted player 235. Deleted player pts. 0
  6. Avatar for TRIBULUS 236. TRIBULUS Lv 1 1 pt. 0
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  10. Avatar for ingoneato 240. ingoneato Lv 1 1 pt. 0

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 18 is highly predicted to be part of a sheet. However, the Leucines at residue 122-123 are highly predicted to be in a helix.