441: De-novo Freestyle 10

Closed since over 14 years ago

Summary

• Created: July 23, 2011
• Expires: July 31, 2011 at 17:00 UTC
• Max points: 100

Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

• 11. Natural Abilities 11 pts. 9,931
• 12. BOINC@Poland 9 pts. 9,893
• 13. Purdue BoilerFolders 7 pts. 9,847
• 14. Deleted group pts. 9,661
• 15. Argentina 4 pts. 9,538
• 16. name_in_progress 3 pts. 9,398
• 17. University of Washington 2 pts. 9,312
• 18. Freedom Folders 1 pt. 9,311
• 19. Crunching Family 1 pt. 9,208
• 20. Nerdfighters 1 pt. 9,105

Top soloists

• 121. Tyggy Too 5 pts. 9,516
• 122. tumor necrosis factor-alpha 4 pts. 9,502
• 123. bluecrab 4 pts. 9,490
• 124. Sellod 4 pts. 9,468
• 125. DC1600 4 pts. 9,447
• 126. Merf 4 pts. 9,402
• 127. GessGuitar 4 pts. 9,398
• 128. vertex 4 pts. 9,366
• 129. Schnecke 4 pts. 9,321
• 130. hargem 3 pts. 9,312

Comments

[beta_helix]

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).