Placeholder image of a protein
Icon representing a puzzle

441: De-novo Freestyle 10

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
July 23, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Natural Abilities 11. Natural Abilities 11 pts. 9,931
  2. Avatar for BOINC@Poland 12. BOINC@Poland 9 pts. 9,893
  3. Avatar for Purdue BoilerFolders 13. Purdue BoilerFolders 7 pts. 9,847
  4. Avatar for Deleted group 14. Deleted group pts. 9,661
  5. Avatar for Argentina 15. Argentina 4 pts. 9,538
  6. Avatar for name_in_progress 16. name_in_progress 3 pts. 9,398
  7. Avatar for University of Washington 17. University of Washington 2 pts. 9,312
  8. Avatar for Freedom Folders 18. Freedom Folders 1 pt. 9,311
  9. Avatar for Crunching Family 19. Crunching Family 1 pt. 9,208
  10. Avatar for Nerdfighters 20. Nerdfighters 1 pt. 9,105
  1. Avatar for Bnevi 221. Bnevi Lv 1 1 pt. 7,448
  2. Avatar for Berkomkon 222. Berkomkon Lv 1 1 pt. 7,448
  3. Avatar for bradleybeth 223. bradleybeth Lv 1 1 pt. 7,448
  4. Avatar for szg969 224. szg969 Lv 1 1 pt. 7,448
  5. Avatar for plh 225. plh Lv 1 1 pt. 7,448
  6. Avatar for lynnj15 226. lynnj15 Lv 1 1 pt. 7,447
  7. Avatar for Fowardint 227. Fowardint Lv 1 1 pt. 7,447
  8. Avatar for The_One 228. The_One Lv 1 1 pt. 7,447
  9. Avatar for Wolf2442 229. Wolf2442 Lv 1 1 pt. 7,446
  10. Avatar for xboxologist 230. xboxologist Lv 1 1 pt. 7,446

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).