Placeholder image of a protein
Icon representing a puzzle

441: De-novo Freestyle 10

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
July 23, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Natural Abilities 11. Natural Abilities 11 pts. 9,931
  2. Avatar for BOINC@Poland 12. BOINC@Poland 9 pts. 9,893
  3. Avatar for Purdue BoilerFolders 13. Purdue BoilerFolders 7 pts. 9,847
  4. Avatar for Deleted group 14. Deleted group pts. 9,661
  5. Avatar for Argentina 15. Argentina 4 pts. 9,538
  6. Avatar for name_in_progress 16. name_in_progress 3 pts. 9,398
  7. Avatar for University of Washington 17. University of Washington 2 pts. 9,312
  8. Avatar for Freedom Folders 18. Freedom Folders 1 pt. 9,311
  9. Avatar for Crunching Family 19. Crunching Family 1 pt. 9,208
  10. Avatar for Nerdfighters 20. Nerdfighters 1 pt. 9,105
  1. Avatar for DrTBone 231. DrTBone Lv 1 1 pt. 7,441
  2. Avatar for Warkittens 232. Warkittens Lv 1 1 pt. 7,439
  3. Avatar for bpierce 233. bpierce Lv 1 1 pt. 7,433
  4. Avatar for racingsnailrider 234. racingsnailrider Lv 1 1 pt. 7,427
  5. Avatar for Erkothegamer 235. Erkothegamer Lv 1 1 pt. 7,426
  6. Avatar for HAPPY ONE 236. HAPPY ONE Lv 1 1 pt. 7,415
  7. Avatar for rand_m 237. rand_m Lv 1 1 pt. 7,411
  8. Avatar for SlavaHem 238. SlavaHem Lv 1 1 pt. 7,087
  9. Avatar for Karsten69 239. Karsten69 Lv 1 1 pt. 7,019
  10. Avatar for ANU 240. ANU Lv 1 1 pt. 6,979

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).