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441: De-novo Freestyle 10

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
July 23, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Team China 21. Team China 1 pt. 8,547
  2. Avatar for Goons with proteins 22. Goons with proteins 1 pt. 8,337
  3. Avatar for ROMANIA Team 23. ROMANIA Team 1 pt. 8,043
  4. Avatar for Cannabis Crew 24. Cannabis Crew 1 pt. 7,559
  5. Avatar for Mojo Risin' 25. Mojo Risin' 1 pt. 7,501
  6. Avatar for DSN @ Home 26. DSN @ Home 1 pt. 7,456
  7. Avatar for Hungary 27. Hungary 1 pt. 7,448
  8. Avatar for Friday Lab 28. Friday Lab 1 pt. 7,448
  9. Avatar for Deleted group 29. Deleted group pts. 2,120
  1. Avatar for Tyggy Too 121. Tyggy Too Lv 1 5 pts. 9,516
  2. Avatar for tumor necrosis factor-alpha 122. tumor necrosis factor-alpha Lv 1 4 pts. 9,502
  3. Avatar for bluecrab 123. bluecrab Lv 1 4 pts. 9,490
  4. Avatar for Sellod 124. Sellod Lv 1 4 pts. 9,468
  5. Avatar for DC1600 125. DC1600 Lv 1 4 pts. 9,447
  6. Avatar for Merf 126. Merf Lv 1 4 pts. 9,402
  7. Avatar for GessGuitar 127. GessGuitar Lv 1 4 pts. 9,398
  8. Avatar for vertex 128. vertex Lv 1 4 pts. 9,366
  9. Avatar for Schnecke 129. Schnecke Lv 1 4 pts. 9,321
  10. Avatar for hargem 130. hargem Lv 1 3 pts. 9,312

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).