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441: De-novo Freestyle 10

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
July 23, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  5. Avatar for SKSbell 25. SKSbell Lv 1 61 pts. 10,417
  6. Avatar for drjr 26. drjr Lv 1 60 pts. 10,407
  7. Avatar for Rav3n_pl 27. Rav3n_pl Lv 1 59 pts. 10,407
  8. Avatar for tyler0911 28. tyler0911 Lv 1 58 pts. 10,391
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  10. Avatar for mberna00 30. mberna00 Lv 1 55 pts. 10,383

Comments

beta_helix Staff Lv 1

These secondary structure predictions have been pre-loaded into this freestyle puzzle.

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 59 is highly predicted to be part of a helix. However, the Valine at residue 80 is highly predicted to be in a sheet or loop region (but not a helix).