Placeholder image of a protein
Icon representing a puzzle

444: De-novo Freestyle 11

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 03, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Eὕρηκα! Heureka! 11. Eὕρηκα! Heureka! 8 pts. 9,660
  2. Avatar for BOINC@Poland 12. BOINC@Poland 6 pts. 9,600
  3. Avatar for Slovak National Team 13. Slovak National Team 4 pts. 9,359
  4. Avatar for OMNABEK 14. OMNABEK 3 pts. 9,324
  5. Avatar for hhv9 15. hhv9 2 pts. 9,240
  6. Avatar for Deleted group 16. Deleted group pts. 9,212
  7. Avatar for xkcd 17. xkcd 1 pt. 9,126
  8. Avatar for Team China 18. Team China 1 pt. 9,020
  9. Avatar for Mojo Risin' 19. Mojo Risin' 1 pt. 8,967
  10. Avatar for Crunching Family 20. Crunching Family 1 pt. 8,949
  1. Avatar for Irmalover 151. Irmalover Lv 1 1 pt. 8,881
  2. Avatar for Arne Heessels 152. Arne Heessels Lv 1 1 pt. 8,837
  3. Avatar for Flixflax 153. Flixflax Lv 1 1 pt. 8,834
  4. Avatar for Shai 154. Shai Lv 1 1 pt. 8,815
  5. Avatar for EALs DAD 155. EALs DAD Lv 1 1 pt. 8,808
  6. Avatar for Darkknight900 156. Darkknight900 Lv 1 1 pt. 8,803
  7. Avatar for delrambo 157. delrambo Lv 1 1 pt. 8,786
  8. Avatar for multaq 158. multaq Lv 1 1 pt. 8,766
  9. Avatar for martinf 159. martinf Lv 1 1 pt. 8,763
  10. Avatar for steveB 160. steveB Lv 1 1 pt. 8,758

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 79 is highly predicted to be part of a helix. However, the Isoleucine at residue 65 has an equal probability of being anything.