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444: De-novo Freestyle 11

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 03, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for foldeRNA
    1. foldeRNA
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  8. Avatar for SETI.Germany 8. SETI.Germany 20 pts. 9,905
  9. Avatar for Russian team 9. Russian team 15 pts. 9,903
  10. Avatar for Deleted group 10. Deleted group pts. 9,831
  1. Avatar for jamiexq 141. jamiexq Lv 1 1 pt. 9,060
  2. Avatar for bluecrab 142. bluecrab Lv 1 1 pt. 9,021
  3. Avatar for bull 143. bull Lv 1 1 pt. 9,020
  4. Avatar for foldthestuffman 144. foldthestuffman Lv 1 1 pt. 8,978
  5. Avatar for richard c 145. richard c Lv 1 1 pt. 8,972
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  7. Avatar for Ryabov Anton 147. Ryabov Anton Lv 1 1 pt. 8,963
  8. Avatar for oscarmichiel 148. oscarmichiel Lv 1 1 pt. 8,957
  9. Avatar for Ladenhorcher 149. Ladenhorcher Lv 1 1 pt. 8,949
  10. Avatar for SataMaxx 150. SataMaxx Lv 1 1 pt. 8,942

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 79 is highly predicted to be part of a helix. However, the Isoleucine at residue 65 has an equal probability of being anything.