Placeholder image of a protein
Icon representing a puzzle

452: De-novo Freestyle 13

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 29, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for BOINC@Poland 11. BOINC@Poland 4 pts. 10,066
  2. Avatar for hhv9 12. hhv9 3 pts. 9,934
  3. Avatar for Richard Dawkins Foundation 13. Richard Dawkins Foundation 2 pts. 9,589
  4. Avatar for Mojo Risin' 14. Mojo Risin' 1 pt. 9,351
  5. Avatar for Tiger Folders 15. Tiger Folders 1 pt. 9,347
  6. Avatar for Crunching Family 16. Crunching Family 1 pt. 9,093
  7. Avatar for Team China 17. Team China 1 pt. 9,023
  8. Avatar for Penny-Arcade 18. Penny-Arcade 1 pt. 8,899
  9. Avatar for Czech National Team 19. Czech National Team 1 pt. 7,905
  10. Avatar for Freedom Folders 20. Freedom Folders 1 pt. 7,467
  1. Avatar for steveB
    1. steveB Lv 1
    100 pts. 10,993
  2. Avatar for aap 2. aap Lv 1 98 pts. 10,916
  3. Avatar for mimi 3. mimi Lv 1 95 pts. 10,856
  4. Avatar for wudoo 4. wudoo Lv 1 92 pts. 10,819
  5. Avatar for deus911 5. deus911 Lv 1 90 pts. 10,775
  6. Avatar for TheGUmmer 6. TheGUmmer Lv 1 87 pts. 10,757
  7. Avatar for martinzblavy 7. martinzblavy Lv 1 85 pts. 10,732
  8. Avatar for Mark- 8. Mark- Lv 1 82 pts. 10,701
  9. Avatar for Ch Garnier 9. Ch Garnier Lv 1 80 pts. 10,664
  10. Avatar for johnmitch 10. johnmitch Lv 1 78 pts. 10,657

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 87 is highly predicted to be part of a sheet. However, the Serine at residue 81 has an equal probability of being anything.

Because this is a long protein, we are giving you 1 extra day to work on it.