Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for chillerdown 11. chillerdown 22 pts. 10,049
  2. Avatar for Russian team 12. Russian team 19 pts. 10,019
  3. Avatar for Deleted group 13. Deleted group pts. 9,911
  4. Avatar for Richard Dawkins Foundation 14. Richard Dawkins Foundation 13 pts. 9,827
  5. Avatar for Deleted group 15. Deleted group pts. 9,804
  6. Avatar for SETI.Germany 16. SETI.Germany 9 pts. 9,703
  7. Avatar for Deleted group 17. Deleted group pts. 9,698
  8. Avatar for Foldit UK 18. Foldit UK 6 pts. 9,578
  9. Avatar for Mmm Helix Fries. 19. Mmm Helix Fries. 5 pts. 9,539
  10. Avatar for Bree Fradley Manning 20. Bree Fradley Manning 4 pts. 9,503
  1. Avatar for Auntiesocial 161. Auntiesocial Lv 1 25 pts. 9,538
  2. Avatar for Tyggy Too 162. Tyggy Too Lv 1 25 pts. 9,522
  3. Avatar for Missy 163. Missy Lv 1 25 pts. 9,522
  4. Avatar for tealight 164. tealight Lv 1 25 pts. 9,518
  5. Avatar for Susanne 165. Susanne Lv 1 24 pts. 9,517
  6. Avatar for Eachus 166. Eachus Lv 1 24 pts. 9,510
  7. Avatar for Wildcat777 167. Wildcat777 Lv 1 24 pts. 9,510
  8. Avatar for Sylva 168. Sylva Lv 1 24 pts. 9,509
  9. Avatar for omrialka 169. omrialka Lv 1 23 pts. 9,509
  10. Avatar for lolbaer 170. lolbaer Lv 1 23 pts. 9,503

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.