Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Eὕρηκα! Heureka! 21. Eὕρηκα! Heureka! 3 pts. 9,498
  2. Avatar for ROMANIA Team 22. ROMANIA Team 2 pts. 9,454
  3. Avatar for Freedom Folders 23. Freedom Folders 2 pts. 9,416
  4. Avatar for No sport meetings 24. No sport meetings 1 pt. 9,356
  5. Avatar for Purdue BoilerFolders 25. Purdue BoilerFolders 1 pt. 9,349
  6. Avatar for Natural Abilities 26. Natural Abilities 1 pt. 9,333
  7. Avatar for Deleted group 27. Deleted group pts. 9,305
  8. Avatar for Deleted group 28. Deleted group pts. 9,226
  9. Avatar for HMT heritage 29. HMT heritage 1 pt. 9,104
  10. Avatar for Team Canada 30. Team Canada 1 pt. 9,083
  1. Avatar for Auntiesocial 161. Auntiesocial Lv 1 25 pts. 9,538
  2. Avatar for Tyggy Too 162. Tyggy Too Lv 1 25 pts. 9,522
  3. Avatar for Missy 163. Missy Lv 1 25 pts. 9,522
  4. Avatar for tealight 164. tealight Lv 1 25 pts. 9,518
  5. Avatar for Susanne 165. Susanne Lv 1 24 pts. 9,517
  6. Avatar for Eachus 166. Eachus Lv 1 24 pts. 9,510
  7. Avatar for Wildcat777 167. Wildcat777 Lv 1 24 pts. 9,510
  8. Avatar for Sylva 168. Sylva Lv 1 24 pts. 9,509
  9. Avatar for omrialka 169. omrialka Lv 1 23 pts. 9,509
  10. Avatar for lolbaer 170. lolbaer Lv 1 23 pts. 9,503

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.