Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Eὕρηκα! Heureka! 21. Eὕρηκα! Heureka! 3 pts. 9,498
  2. Avatar for ROMANIA Team 22. ROMANIA Team 2 pts. 9,454
  3. Avatar for Freedom Folders 23. Freedom Folders 2 pts. 9,416
  4. Avatar for No sport meetings 24. No sport meetings 1 pt. 9,356
  5. Avatar for Purdue BoilerFolders 25. Purdue BoilerFolders 1 pt. 9,349
  6. Avatar for Natural Abilities 26. Natural Abilities 1 pt. 9,333
  7. Avatar for Deleted group 27. Deleted group pts. 9,305
  8. Avatar for Deleted group 28. Deleted group pts. 9,226
  9. Avatar for HMT heritage 29. HMT heritage 1 pt. 9,104
  10. Avatar for Team Canada 30. Team Canada 1 pt. 9,083
  1. Avatar for yimmieg 571. yimmieg Lv 1 1 pt. 7,511
  2. Avatar for Jerome pohu 572. Jerome pohu Lv 1 1 pt. 7,509
  3. Avatar for dsz930712 573. dsz930712 Lv 1 1 pt. 7,509
  4. Avatar for sftgfop1 574. sftgfop1 Lv 1 1 pt. 7,509
  5. Avatar for M-Nikz 575. M-Nikz Lv 1 1 pt. 7,508
  6. Avatar for mcrain9563 576. mcrain9563 Lv 1 1 pt. 7,502
  7. Avatar for Killahurtz 577. Killahurtz Lv 1 1 pt. 7,501
  8. Avatar for ninitsu 578. ninitsu Lv 1 1 pt. 7,499
  9. Avatar for mazen1134 579. mazen1134 Lv 1 1 pt. 7,495
  10. Avatar for i can dig it 580. i can dig it Lv 1 1 pt. 7,492

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.