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469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  3. Avatar for Cfence 93. Cfence Lv 1 48 pts. 9,846
  4. Avatar for TheedMan 94. TheedMan Lv 1 47 pts. 9,844
  5. Avatar for heather-1 95. heather-1 Lv 1 47 pts. 9,829
  6. Avatar for ege 96. ege Lv 1 46 pts. 9,829
  7. Avatar for NegativeEntropy 97. NegativeEntropy Lv 1 46 pts. 9,827
  8. Avatar for aricc 98. aricc Lv 1 45 pts. 9,825
  9. Avatar for tedeum 99. tedeum Lv 1 45 pts. 9,824
  10. Avatar for dembones 100. dembones Lv 1 45 pts. 9,823

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.