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469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Team China 31. Team China 1 pt. 9,057
  2. Avatar for Valencia 32. Valencia 1 pt. 8,633
  3. Avatar for Hungary 33. Hungary 1 pt. 8,473
  4. Avatar for Street Smarts 34. Street Smarts 1 pt. 8,372
  5. Avatar for Deleted group 35. Deleted group pts. 8,283
  6. Avatar for Minions of TWIS 36. Minions of TWIS 1 pt. 8,212
  7. Avatar for Crunching Family 37. Crunching Family 1 pt. 8,155
  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
  1. Avatar for Savas 171. Savas Lv 1 23 pts. 9,498
  2. Avatar for Subterminal 172. Subterminal Lv 1 23 pts. 9,498
  3. Avatar for Mike Cassidy 173. Mike Cassidy Lv 1 22 pts. 9,496
  4. Avatar for t_backdahl 174. t_backdahl Lv 1 22 pts. 9,488
  5. Avatar for Hellcat6 175. Hellcat6 Lv 1 22 pts. 9,485
  6. Avatar for frozenice9 176. frozenice9 Lv 1 22 pts. 9,483
  7. Avatar for Helmke 177. Helmke Lv 1 22 pts. 9,475
  8. Avatar for Fat Tony 178. Fat Tony Lv 1 21 pts. 9,462
  9. Avatar for SabineA 179. SabineA Lv 1 21 pts. 9,461
  10. Avatar for Shai 180. Shai Lv 1 21 pts. 9,454

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.