Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Team China 31. Team China 1 pt. 9,057
  2. Avatar for Valencia 32. Valencia 1 pt. 8,633
  3. Avatar for Hungary 33. Hungary 1 pt. 8,473
  4. Avatar for Street Smarts 34. Street Smarts 1 pt. 8,372
  5. Avatar for Deleted group 35. Deleted group pts. 8,283
  6. Avatar for Minions of TWIS 36. Minions of TWIS 1 pt. 8,212
  7. Avatar for Crunching Family 37. Crunching Family 1 pt. 8,155
  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
  1. Avatar for mat747 11. mat747 Lv 1 93 pts. 10,275
  2. Avatar for jfryk 12. jfryk Lv 1 92 pts. 10,242
  3. Avatar for Tony Origami 13. Tony Origami Lv 1 92 pts. 10,210
  4. Avatar for Junker 14. Junker Lv 1 91 pts. 10,201
  5. Avatar for Mark- 15. Mark- Lv 1 90 pts. 10,199
  6. Avatar for mottiger 16. mottiger Lv 1 90 pts. 10,185
  7. Avatar for NinjaGreg 17. NinjaGreg Lv 1 89 pts. 10,174
  8. Avatar for mimi 18. mimi Lv 1 88 pts. 10,171
  9. Avatar for Ch Garnier 19. Ch Garnier Lv 1 88 pts. 10,170
  10. Avatar for gmn 20. gmn Lv 1 87 pts. 10,149

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.