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469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
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  6. Avatar for GreyAn 406. GreyAn Lv 1 1 pt. 8,360
  7. Avatar for Bader Yasin 407. Bader Yasin Lv 1 1 pt. 8,360
  8. Avatar for Etrnls 408. Etrnls Lv 1 1 pt. 8,360
  9. Avatar for streamline 409. streamline Lv 1 1 pt. 8,357
  10. Avatar for johngran 410. johngran Lv 1 1 pt. 8,353

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.