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469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  3. Avatar for Hungary 33. Hungary 1 pt. 8,473
  4. Avatar for Street Smarts 34. Street Smarts 1 pt. 8,372
  5. Avatar for Deleted group 35. Deleted group pts. 8,283
  6. Avatar for Minions of TWIS 36. Minions of TWIS 1 pt. 8,212
  7. Avatar for Crunching Family 37. Crunching Family 1 pt. 8,155
  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
  1. Avatar for NoahZark 461. NoahZark Lv 1 1 pt. 8,016
  2. Avatar for KelabS 462. KelabS Lv 1 1 pt. 8,014
  3. Avatar for Deleted player 463. Deleted player pts. 8,009
  4. Avatar for hunter47175 464. hunter47175 Lv 1 1 pt. 8,000
  5. Avatar for portalbob340 465. portalbob340 Lv 1 1 pt. 7,990
  6. Avatar for clarkwbird 466. clarkwbird Lv 1 1 pt. 7,985
  7. Avatar for hiroyuki_kawaguchi 467. hiroyuki_kawaguchi Lv 1 1 pt. 7,981
  8. Avatar for tattimaisteri 468. tattimaisteri Lv 1 1 pt. 7,980
  9. Avatar for pugna_vel_intereo 469. pugna_vel_intereo Lv 1 1 pt. 7,976
  10. Avatar for elzbietka 470. elzbietka Lv 1 1 pt. 7,975

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.