Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Advanced Overall Overall Prediction Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Team China 31. Team China 1 pt. 9,057
  2. Avatar for Valencia 32. Valencia 1 pt. 8,633
  3. Avatar for Hungary 33. Hungary 1 pt. 8,473
  4. Avatar for Street Smarts 34. Street Smarts 1 pt. 8,372
  5. Avatar for Deleted group 35. Deleted group pts. 8,283
  6. Avatar for Minions of TWIS 36. Minions of TWIS 1 pt. 8,212
  7. Avatar for Crunching Family 37. Crunching Family 1 pt. 8,155
  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
  1. Avatar for Brenwalt 501. Brenwalt Lv 1 1 pt. 7,699
  2. Avatar for poiuytrewq 502. poiuytrewq Lv 1 1 pt. 7,686
  3. Avatar for Sneezie 503. Sneezie Lv 1 1 pt. 7,684
  4. Avatar for d1jx 504. d1jx Lv 1 1 pt. 7,675
  5. Avatar for Dakdadaah 505. Dakdadaah Lv 1 1 pt. 7,637
  6. Avatar for Mephesh 506. Mephesh Lv 1 1 pt. 7,629
  7. Avatar for medic7 507. medic7 Lv 1 1 pt. 7,626
  8. Avatar for 1370joey 508. 1370joey Lv 1 1 pt. 7,618
  9. Avatar for demonIO 509. demonIO Lv 1 1 pt. 7,613
  10. Avatar for Rocks25 510. Rocks25 Lv 1 1 pt. 7,613

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.