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469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  4. Avatar for Street Smarts 34. Street Smarts 1 pt. 8,372
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  7. Avatar for Crunching Family 37. Crunching Family 1 pt. 8,155
  8. Avatar for DSN @ Home 38. DSN @ Home 1 pt. 7,517
  9. Avatar for test_group1 39. test_group1 1 pt. 6,151
  1. Avatar for Azolo 511. Azolo Lv 1 1 pt. 7,607
  2. Avatar for s8867 512. s8867 Lv 1 1 pt. 7,595
  3. Avatar for absturz 513. absturz Lv 1 1 pt. 7,580
  4. Avatar for Foogleplex 514. Foogleplex Lv 1 1 pt. 7,580
  5. Avatar for jk_medapo 515. jk_medapo Lv 1 1 pt. 7,572
  6. Avatar for Robinso 516. Robinso Lv 1 1 pt. 7,560
  7. Avatar for exequelism 517. exequelism Lv 1 1 pt. 7,555
  8. Avatar for medicman327 518. medicman327 Lv 1 1 pt. 7,553
  9. Avatar for bluespirt4 519. bluespirt4 Lv 1 1 pt. 7,552
  10. Avatar for Elyot 520. Elyot Lv 1 1 pt. 7,552

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.