Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 10,478
  2. Avatar for Androids 2. Androids 88 pts. 10,462
  3. Avatar for Contenders 3. Contenders 77 pts. 10,456
  4. Avatar for Void Crushers 4. Void Crushers 67 pts. 10,438
  5. Avatar for foldeRNA 5. foldeRNA 58 pts. 10,305
  6. Avatar for Go Science 6. Go Science 50 pts. 10,204
  7. Avatar for Deleted group 7. Deleted group pts. 10,201
  8. Avatar for L'Alliance Francophone 8. L'Alliance Francophone 37 pts. 10,170
  9. Avatar for CHNO Junkies 9. CHNO Junkies 31 pts. 10,126
  10. Avatar for BOINC@Poland 10. BOINC@Poland 26 pts. 10,110
  1. Avatar for paulbeach2 631. paulbeach2 Lv 1 1 pt. 6,151
  2. Avatar for test_account2 632. test_account2 Lv 1 1 pt. 6,151
  3. Avatar for kym 633. kym Lv 1 1 pt. 6,151
  4. Avatar for Xiong 634. Xiong Lv 1 1 pt. 6,151
  5. Avatar for bharathwaj 635. bharathwaj Lv 1 1 pt. 6,151
  6. Avatar for test_account1 636. test_account1 Lv 1 1 pt. 6,151
  7. Avatar for Glaciuse 637. Glaciuse Lv 1 1 pt. 6,151
  8. Avatar for bielitz 638. bielitz Lv 1 1 pt. 6,151
  9. Avatar for Tom B. 639. Tom B. Lv 1 1 pt. 6,151
  10. Avatar for koreqed 640. koreqed Lv 1 1 pt. 6,151

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.