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475: U2 RNA auxiliary factor Freestyle

Closed since over 14 years ago

Intermediate Overall Prediction

Summary

Created
October 30, 2011
Expires
Max points
100
Description

This U2 small nuclear ribonucleoprotein auxiliary factor protein is currently unsolved by x-ray crystallography. We are giving it to you as a freestyle puzzle. Please use the secondary structure predictions that are posted in the puzzle comments, as we believe them to be very accurate. We have included them in the starting structure as well.

Top groups

  1. Avatar for Crunching Family 31. Crunching Family 1 pt. 8,566
  2. Avatar for Czech National Team 32. Czech National Team 1 pt. 8,418
  3. Avatar for Edugeek 33. Edugeek 1 pt. 8,406
  4. Avatar for Deleted group 34. Deleted group pts. 8,353
  5. Avatar for HMT heritage 35. HMT heritage 1 pt. 8,304
  6. Avatar for Deleted group 36. Deleted group pts. 7,917
  7. Avatar for Richard Dawkins Foundation 37. Richard Dawkins Foundation 1 pt. 7,851
  8. Avatar for Bree Fradley Manning 38. Bree Fradley Manning 1 pt. 7,835
  9. Avatar for Dutch Power Cows 39. Dutch Power Cows 1 pt. 7,646
  10. Avatar for DSN @ Home 40. DSN @ Home 1 pt. 7,520
  1. Avatar for iLLo 121. iLLo Lv 1 26 pts. 9,543
  2. Avatar for JasperD 122. JasperD Lv 1 26 pts. 9,541
  3. Avatar for EALs DAD 123. EALs DAD Lv 1 26 pts. 9,539
  4. Avatar for TheedMan 124. TheedMan Lv 1 25 pts. 9,535
  5. Avatar for katanyag 125. katanyag Lv 1 25 pts. 9,533
  6. Avatar for Schleicher 126. Schleicher Lv 1 25 pts. 9,531
  7. Avatar for Museka 127. Museka Lv 1 24 pts. 9,531
  8. Avatar for pvc78 128. pvc78 Lv 1 24 pts. 9,529
  9. Avatar for tlwillia 129. tlwillia Lv 1 24 pts. 9,527
  10. Avatar for popandbob 130. popandbob Lv 1 23 pts. 9,526

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the three Valines at residues 87-89 are highly predicted to be part of a sheet. However, the Valine at residue 31 is highly predicted to be part of a helix.