Closed since over 14 years ago
Intermediate Intermediate Overall Overall Prediction PredictionWe are posting 10 more starts for the unsolved Nanog protein (while it's still fresh in your mind). Resetting the puzzle will cycle through 10 Quark server predictions that are also in the Alignment Tool so you can use partial threading. This puzzle will be up for 2 weeks and worth 175 global points! More info in the puzzle comments and blog: http://fold.it/portal/node/991003
You can see the 10 Quark Server results (where you'll find secondary structure & burial predictions) here:
http://zhanglab.ccmb.med.umich.edu/QUARK/output/Q14089/
Additional information on partial threading here:
http://fold.it/portal/node/989193#comment-9965
Please make sure to try out all 10 starting server models, since we have no clue which one is closer to the correct native structure.
it is great that we can see the jmol for each alignment excellent in a side by side comparision - however I found that if I tried to line them up to compare them they started spinning randomly which defeated my purpose.
we have no control over that page.
They are the same models as your starting structures, however, so you can save the starting model and load it in as a guide to compare between them.
Hopefully that helps a bit!
