Placeholder image of a protein
Icon representing a puzzle

503: CASP ROLL Puzzle 3c

Closed since about 14 years ago

Intermediate Overall Prediction

Summary

Created
January 12, 2012
Expires
Max points
100
Description

We are reposting the third CASP ROLL target, R0003, but this time we are providing you with server predictions. Resetting the puzzle will cycle through 10 different server predictions. They are also available in the Alignment Tool so you can use partial threading. We are giving you 10 days to work on this target (worth 120 points) so make sure to try out all 10 server models.

Top groups

  1. Avatar for SETI.Germany 11. SETI.Germany 23 pts. 8,516
  2. Avatar for FoldIt@Netherlands 12. FoldIt@Netherlands 20 pts. 8,514
  3. Avatar for Deleted group 13. Deleted group pts. 8,508
  4. Avatar for xkcd 14. xkcd 14 pts. 8,501
  5. Avatar for chillerdown 15. chillerdown 11 pts. 8,499
  6. Avatar for NETD 16. NETD 9 pts. 8,498
  7. Avatar for Deleted group 17. Deleted group pts. 8,495
  8. Avatar for Piratenpartei Deutschland 18. Piratenpartei Deutschland 6 pts. 8,493
  9. Avatar for Russian team 19. Russian team 5 pts. 8,492
  10. Avatar for Deleted group 20. Deleted group pts. 8,476
  1. Avatar for Bedbed 371. Bedbed Lv 1 1 pt. 8,253
  2. Avatar for fatcat336 372. fatcat336 Lv 1 1 pt. 8,253
  3. Avatar for jmurphy15 373. jmurphy15 Lv 1 1 pt. 8,253
  4. Avatar for JohnQSample 374. JohnQSample Lv 1 1 pt. 8,253
  5. Avatar for brunothecheese 375. brunothecheese Lv 1 1 pt. 8,253
  6. Avatar for Jakob_Smyk 376. Jakob_Smyk Lv 1 1 pt. 8,252
  7. Avatar for jhulten 377. jhulten Lv 1 1 pt. 8,252
  8. Avatar for Alangrey 378. Alangrey Lv 1 1 pt. 8,251
  9. Avatar for cdwatson 379. cdwatson Lv 1 1 pt. 8,251
  10. Avatar for pachky 380. pachky Lv 1 1 pt. 8,250

Comments

beta_helix Staff Lv 1

Since this target has many Cysteines, we have enabled disulfide bonding for this puzzle. More info about Disulfide Bridges in Foldit here: http://foldit.wikia.com/wiki/Disulfide_Bridge. Once formed, you'll need to click "Show Bonds (sidechain)" to view them.
_______________________

You'll also notice that these server predictions did not form many disulfide bridges (and also that most of these predictions converged to very similar solutions). This may answer the comment from puzzle 499 about why disulfide bonding does not result in a big score gain:

http://fold.it/portal/node/991383#comment-14646