Placeholder image of a protein
Icon representing a puzzle

503: CASP ROLL Puzzle 3c

Closed since about 14 years ago

Intermediate Overall Prediction

Summary

Created
January 12, 2012
Expires
Max points
100
Description

We are reposting the third CASP ROLL target, R0003, but this time we are providing you with server predictions. Resetting the puzzle will cycle through 10 different server predictions. They are also available in the Alignment Tool so you can use partial threading. We are giving you 10 days to work on this target (worth 120 points) so make sure to try out all 10 server models.

Top groups

  1. Avatar for Go Science
    1. Go Science
    100 pts. 8,601
  2. Avatar for Contenders 2. Contenders 88 pts. 8,581
  3. Avatar for L'Alliance Francophone 3. L'Alliance Francophone 77 pts. 8,567
  4. Avatar for foldeRNA 4. foldeRNA 68 pts. 8,563
  5. Avatar for Androids 5. Androids 59 pts. 8,558
  6. Avatar for Anthropic Dreams 6. Anthropic Dreams 51 pts. 8,552
  7. Avatar for Needles and Pins 7. Needles and Pins 44 pts. 8,535
  8. Avatar for Void Crushers 8. Void Crushers 38 pts. 8,529
  9. Avatar for HMT heritage 9. HMT heritage 32 pts. 8,528
  10. Avatar for Foldit UK 10. Foldit UK 27 pts. 8,528
  1. Avatar for weitzen 131. weitzen Lv 1 27 pts. 8,474
  2. Avatar for SouperGenious 132. SouperGenious Lv 1 27 pts. 8,474
  3. Avatar for j_johnso 133. j_johnso Lv 1 26 pts. 8,474
  4. Avatar for randomlil 134. randomlil Lv 1 26 pts. 8,474
  5. Avatar for Museka 135. Museka Lv 1 26 pts. 8,473
  6. Avatar for Mike Cassidy 136. Mike Cassidy Lv 1 25 pts. 8,473
  7. Avatar for drjr 137. drjr Lv 1 25 pts. 8,472
  8. Avatar for brow42 138. brow42 Lv 1 25 pts. 8,472
  9. Avatar for Cfence 139. Cfence Lv 1 24 pts. 8,470
  10. Avatar for Miedzix 140. Miedzix Lv 1 24 pts. 8,468

Comments

beta_helix Staff Lv 1

Since this target has many Cysteines, we have enabled disulfide bonding for this puzzle. More info about Disulfide Bridges in Foldit here: http://foldit.wikia.com/wiki/Disulfide_Bridge. Once formed, you'll need to click "Show Bonds (sidechain)" to view them.
_______________________

You'll also notice that these server predictions did not form many disulfide bridges (and also that most of these predictions converged to very similar solutions). This may answer the comment from puzzle 499 about why disulfide bonding does not result in a big score gain:

http://fold.it/portal/node/991383#comment-14646